| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812329
Identifier: 237812329
GI number: 237812329
Start: 2046417
End: 2046836
Strand: Direct
Name: 237812329
Synonym: GBP346_A2077
Alternate gene names: NA
Gene position: 2046417-2046836 (Clockwise)
Preceding gene: 237812328
Following gene: 237812332
Centisome position: 49.93
GC content: 61.67
Gene sequence:
>420_bases GTGATCGCCATGACTATCCTCGCCGAGGCCGCCGACCTGCGCCGCCTCGGTCACCACCGTCAGTTCCTGAAGTACTGCGG ATTCGACCTAGCGAAGATACAGTCGGGTACCCAGCGGGGGCGCGAGCAACTCTCCAAGCGCGGCAATGCACGGTTGCGGC TGGCCTTCTGGATGGCAGGCATGGCTGCCGTGCGCATGAAGGAGAACTCATTCCGCTCGAAATATGAACGTTACGTCCAT GCAGATCCGGACGACGCTGACCTCAAGCGCAAGGCGCTGACCGCCGTGGCAGCGAAGATGGCTCGCGTGGCTTACGGCAT GATCAAGAAGAACCAGCCTTACAGGCAGTTCTTCGAACTCGGTTTACCCAGTGGATCGATCCCTCTGTCGGCTGCCGTTG GGGCGCAGGCGACCCCGTAG
Upstream 100 bases:
>100_bases GCTCAACGTACTGCGAGCGGCAATCGAGGCGTGCGCCGAGGCGGAGCTTCACGACAATATCGACTTCGCCCATCTGAAGA CGCTGCCTGGCATTGGCTCG
Downstream 100 bases:
>100_bases ATAATGCTCGGACCTTCCGCTGGGGCTTCTATGCTGTTTTAGGTACGGTGAAGATCACGCCCTGTGCGATGAATCTTGTG TCTACTATGGTCAGCAAGCC
Product: transposase
Products: NA
Alternate protein names: Insertion Sequence Transposase Protein; ISYps2 Transposase; Isxal6 Transposase Orfb Protein; Transposase Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MIAMTILAEAADLRRLGHHRQFLKYCGFDLAKIQSGTQRGREQLSKRGNARLRLAFWMAGMAAVRMKENSFRSKYERYVH ADPDDADLKRKALTAVAAKMARVAYGMIKKNQPYRQFFELGLPSGSIPLSAAVGAQATP
Sequences:
>Translated_139_residues MIAMTILAEAADLRRLGHHRQFLKYCGFDLAKIQSGTQRGREQLSKRGNARLRLAFWMAGMAAVRMKENSFRSKYERYVH ADPDDADLKRKALTAVAAKMARVAYGMIKKNQPYRQFFELGLPSGSIPLSAAVGAQATP >Mature_139_residues MIAMTILAEAADLRRLGHHRQFLKYCGFDLAKIQSGTQRGREQLSKRGNARLRLAFWMAGMAAVRMKENSFRSKYERYVH ADPDDADLKRKALTAVAAKMARVAYGMIKKNQPYRQFFELGLPSGSIPLSAAVGAQATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15546; Mature: 15546
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMTILAEAADLRRLGHHRQFLKYCGFDLAKIQSGTQRGREQLSKRGNARLRLAFWMAG CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH MAAVRMKENSFRSKYERYVHADPDDADLKRKALTAVAAKMARVAYGMIKKNQPYRQFFEL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GLPSGSIPLSAAVGAQATP CCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MIAMTILAEAADLRRLGHHRQFLKYCGFDLAKIQSGTQRGREQLSKRGNARLRLAFWMAG CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH MAAVRMKENSFRSKYERYVHADPDDADLKRKALTAVAAKMARVAYGMIKKNQPYRQFFEL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GLPSGSIPLSAAVGAQATP CCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA