| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is b1578 [C]
Identifier: 237812317
GI number: 237812317
Start: 2039150
End: 2039338
Strand: Direct
Name: b1578 [C]
Synonym: GBP346_A2065
Alternate gene names: 237812317
Gene position: 2039150-2039338 (Clockwise)
Preceding gene: 237812316
Following gene: 237812318
Centisome position: 49.75
GC content: 55.03
Gene sequence:
>189_bases GTGGCGAAGAGCTTCGTGACGATGAAGCGTGACTATGTCGCCTTCATGTCGAAACTAAATGCGACCACCGCAGTGCGTCA TCCTGCCGACGCGTTCGAACACTACAACGACCAGTGTCATCACGGCGCACTGCAATATCGCTCGCCATGCGAAATCCGAC GCAGAACCGACTCATCAACTCGTGTGTGA
Upstream 100 bases:
>100_bases AAACGCTAATCGACAATGGCTCGGGCTATACGGCGGCGAAAACCCGGGCTTTCGTATCCGACATTGGACCGAAACCATTG ATCACACCGCTAGTAATAGC
Downstream 100 bases:
>100_bases GGTGGTTTCCGGAGGGAGAGCGGCAAATCCAATACCCGATGGCCCCTCCCATCTCGACTCGACGGTTCACATACACTTCG AGATCGTATTTTTTCAAACC
Product: isrso10-transposase orfb protein
Products: ADP; phosphate; 5-phosphoribosyl-n-formylglycineamidine; L-glutamate [C]
Alternate protein names: Integrase Catalytic Region; Isrso10-Transposase Orfb Protein
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MAKSFVTMKRDYVAFMSKLNATTAVRHPADAFEHYNDQCHHGALQYRSPCEIRRRTDSSTRV
Sequences:
>Translated_62_residues MAKSFVTMKRDYVAFMSKLNATTAVRHPADAFEHYNDQCHHGALQYRSPCEIRRRTDSSTRV >Mature_61_residues AKSFVTMKRDYVAFMSKLNATTAVRHPADAFEHYNDQCHHGALQYRSPCEIRRRTDSSTRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7204; Mature: 7073
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSFVTMKRDYVAFMSKLNATTAVRHPADAFEHYNDQCHHGALQYRSPCEIRRRTDSST CCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC RV CC >Mature Secondary Structure AKSFVTMKRDYVAFMSKLNATTAVRHPADAFEHYNDQCHHGALQYRSPCEIRRRTDSST CCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC RV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 5'-phosphoribosyl-N-formylglycineamide; L-glutamine; H2O [C]
Specific reaction: ATP + 5'-phosphoribosyl-N-formylglycineamide + L-glutamine + H2O = ADP + phosphate + 5-phosphoribosyl-n-formylglycineamidine + L-glutamate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA