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The map label for this gene is insC1 [C]

Identifier: 237812316

GI number: 237812316

Start: 2038300

End: 2038695

Strand: Direct

Name: insC1 [C]

Synonym: GBP346_A2064

Alternate gene names: 237812316

Gene position: 2038300-2038695 (Clockwise)

Preceding gene: 237812315

Following gene: 237812317

Centisome position: 49.73

GC content: 56.31

Gene sequence:

>396_bases
GTGTTTTCGACTAACAACAAACAAGAAATAATGGAAGTGTTGATGGGACCGGAGCGACGATGGCGATGGTCAGTGAAGGA
GAAGCTGGCGACGGCGCGAGAGAGCTTCGAGCCGGGCAAGTCGGTCTCAACGGTTGCACGGCGGCACCGTGTCAATCCCG
ACCAGTTGCTCCATTGGCGCAAGCTGTATCAGGATGGCAGTCTGTCGGCAGTCAGTGCCGGCGAAGAAGTTGTGCCAACG
TCGAATCTGAGCAATGCCCTCAAGCAAATTCGTGAGCTTCAGCAACTGCTCGGCAAAAAGACCGTAGATAACGAAATTCC
TCGTGAGGCACCGGAGGCGGCGAAGTCGCAAGCAAGGATTGCGCGCTTGCTCTCCATGCCGGGGGACGAACAGTGA

Upstream 100 bases:

>100_bases
GGGAACTAATTTTGTTTGATGGCCCCTGGTAATGGCTTGGGGCAGCCCCCTGAATTGCCGAATACAGTCCTCACTTAAAA
TGGCGAGTAGGCATACGACG

Downstream 100 bases:

>100_bases
AGCAGGTCCGCGATGTTCTCGGTGTAGCGCGCTCGACTTTGACGGCAAGGCTTGCAAGGCTGGCTGACTATCGGTTAATG
CGCGCTCACGGCCTGCCGCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MFSTNNKQEIMEVLMGPERRWRWSVKEKLATARESFEPGKSVSTVARRHRVNPDQLLHWRKLYQDGSLSAVSAGEEVVPT
SNLSNALKQIRELQQLLGKKTVDNEIPREAPEAAKSQARIARLLSMPGDEQ

Sequences:

>Translated_131_residues
MFSTNNKQEIMEVLMGPERRWRWSVKEKLATARESFEPGKSVSTVARRHRVNPDQLLHWRKLYQDGSLSAVSAGEEVVPT
SNLSNALKQIRELQQLLGKKTVDNEIPREAPEAAKSQARIARLLSMPGDEQ
>Mature_131_residues
MFSTNNKQEIMEVLMGPERRWRWSVKEKLATARESFEPGKSVSTVARRHRVNPDQLLHWRKLYQDGSLSAVSAGEEVVPT
SNLSNALKQIRELQQLLGKKTVDNEIPREAPEAAKSQARIARLLSMPGDEQ

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=116, Percent_Identity=54.3103448275862, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI145693180, Length=116, Percent_Identity=54.3103448275862, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI145693177, Length=116, Percent_Identity=54.3103448275862, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI145693154, Length=116, Percent_Identity=54.3103448275862, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI145693126, Length=116, Percent_Identity=54.3103448275862, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI145693097, Length=116, Percent_Identity=54.3103448275862, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14880; Mature: 14880

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTNNKQEIMEVLMGPERRWRWSVKEKLATARESFEPGKSVSTVARRHRVNPDQLLHWR
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
KLYQDGSLSAVSAGEEVVPTSNLSNALKQIRELQQLLGKKTVDNEIPREAPEAAKSQARI
HHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHH
ARLLSMPGDEQ
HHHHHCCCCCC
>Mature Secondary Structure
MFSTNNKQEIMEVLMGPERRWRWSVKEKLATARESFEPGKSVSTVARRHRVNPDQLLHWR
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
KLYQDGSLSAVSAGEEVVPTSNLSNALKQIRELQQLLGKKTVDNEIPREAPEAAKSQARI
HHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHH
ARLLSMPGDEQ
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA