| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812307
Identifier: 237812307
GI number: 237812307
Start: 2024962
End: 2025084
Strand: Reverse
Name: 237812307
Synonym: GBP346_A2055
Alternate gene names: NA
Gene position: 2025084-2024962 (Counterclockwise)
Preceding gene: 237812308
Following gene: 237812288
Centisome position: 49.41
GC content: 41.46
Gene sequence:
>123_bases TTGATTGCCCGAATCGTCGCGATCAGTCCACATACAATATTTGACATAATATCAATTATCGACATTTCAGGCGCAAGAGC AAAAGTTGTCATGTCGCATCTGGGCAAAGTTGAAATGTCGTAG
Upstream 100 bases:
>100_bases GAGCATAAAAAACGCCTGCTCATGGCAGGCGTGTCGAAGGAGATGATTTTGGGCTTGCTACGCTGTTGCCGGACGCGTGA TTGTCAGGGACAGGGCTGCT
Downstream 100 bases:
>100_bases TTCGAGGGTTTCGGCGCATGCTGCCGGCGGTTTGAACTGCCGGAGCGCATCGTGGGCCAACTTTGAATTGATCACCATGA GCATGCGGGAGCTGGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MIARIVAISPHTIFDIISIIDISGARAKVVMSHLGKVEMS
Sequences:
>Translated_40_residues MIARIVAISPHTIFDIISIIDISGARAKVVMSHLGKVEMS >Mature_40_residues MIARIVAISPHTIFDIISIIDISGARAKVVMSHLGKVEMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4321; Mature: 4321
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARIVAISPHTIFDIISIIDISGARAKVVMSHLGKVEMS CCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MIARIVAISPHTIFDIISIIDISGARAKVVMSHLGKVEMS CCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA