| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812224
Identifier: 237812224
GI number: 237812224
Start: 1923863
End: 1924702
Strand: Direct
Name: 237812224
Synonym: GBP346_A1970
Alternate gene names: NA
Gene position: 1923863-1924702 (Clockwise)
Preceding gene: 237812223
Following gene: 237812228
Centisome position: 46.94
GC content: 68.57
Gene sequence:
>840_bases ATGGCAAAGAAGAAACTCGTCTACATCTGGTCGCTCAGAAACGCCGCCGCCGACAAGGCGGGGCAGCAGGTGGACTACAA GGGCGGCACGCGCTACATGAAATCGGTGCTCGAATCGCTCGTCGGCGCATTGAACGACACCGAGCTCGGCGACGCGTATT CGCTCGAGCGCGTGATCTACGACGACGACGCGGGCTCGCCGCTCGACCGCGAGAAGCTCGCCGAGTACGGCTTCGCGTAC GAGCCCGGCAAGCGCTGGTTCTATCCGCCCGCGCTGCGCGTGCAGGGCCGCCTCGTCAACGATCTGCTGCTCGCGATTCC GTCCGAGTACCGGCGCGAGCCGCTCGCGTCGCCGGCGCGCCCGGCGGGCAAGCGCGCGTTCGAGGCGCGCCTGCGCGAGA CGCTCGACGCGCTCGGCGCCGATCTCGTCGTGCTCGACGGGCTGCTCGTGATCCTCGACGAACTCGTGCGCCCCGGCGCG CCGTATTGCCGGCGGATCGTCAACATCCACCCGGGCATCACGCGCGCGGACTCGCCGTACGAGCGGCGCGGCGCGTATGC GACGCTCGACGCGCTGTTCGGCGCGCGCGGGCAGAAGGTCGTCGACTGGAAGACGGGCCGGACCATGCCCGTCGAGCCGC TCAGGATGACGGGCGCGTCGTTCCATTACGTCGACAACGGCGTCGATTCGGGCGAGGTGATCCACGACGTGCTGAACACC GAGATCGATCCGGACGACACGATCCTCGAGCTGCGCTGGAACAACTTCAACCGCAGCCTCTTTCCGGCGCTGCACGAAGG GCTCGCGATCATGGCGGGGCTCGACGCGCGCGTCGCGTGA
Upstream 100 bases:
>100_bases CGCACCGTGATCGCGACCGCGAAATACAACTGGTAAGCGCGTTTCATCACCCGATGGGCGGCGCGGCGGCGCGCCGCCCG AACGAGAGGACAACACTGCG
Downstream 100 bases:
>100_bases GCGGCGCGGCGCACGGCACGCGCGGGCCGTGCGGGGCGGCGCGGCGGCATGGCGAAGCGGCCGGCGACGCGCACGCGTCG CGCGGCGGCTCGCGCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Siderophore Biosynthesis Related Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIYDDDAGSPLDREKLAEYGFAY EPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPARPAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGA PYCRRIVNIHPGITRADSPYERRGAYATLDALFGARGQKVVDWKTGRTMPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA
Sequences:
>Translated_279_residues MAKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIYDDDAGSPLDREKLAEYGFAY EPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPARPAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGA PYCRRIVNIHPGITRADSPYERRGAYATLDALFGARGQKVVDWKTGRTMPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA >Mature_278_residues AKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIYDDDAGSPLDREKLAEYGFAYE PGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPARPAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGAP YCRRIVNIHPGITRADSPYERRGAYATLDALFGARGQKVVDWKTGRTMPVEPLRMTGASFHYVDNGVDSGEVIHDVLNTE IDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31032; Mature: 30900
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIY CCCCEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEE DDDAGSPLDREKLAEYGFAYEPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPAR ECCCCCCCCHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCC PAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGAPYCRRIVNIHPGITRADSPY CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH ERRGAYATLDALFGARGQKVVDWKTGRTMPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT HHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHCC EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIY CCCEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEE DDDAGSPLDREKLAEYGFAYEPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPAR ECCCCCCCCHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCC PAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGAPYCRRIVNIHPGITRADSPY CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH ERRGAYATLDALFGARGQKVVDWKTGRTMPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT HHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHCC EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA