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The map label for this gene is yhfQ [H]

Identifier: 237812216

GI number: 237812216

Start: 1900018

End: 1901214

Strand: Direct

Name: yhfQ [H]

Synonym: GBP346_A1962

Alternate gene names: 237812216

Gene position: 1900018-1901214 (Clockwise)

Preceding gene: 237812215

Following gene: 237812220

Centisome position: 46.36

GC content: 75.19

Gene sequence:

>1197_bases
TTGACCGCGTGGGCGCGGCGCGCGGCGCGATTCGCCCGGTTGCCGATCGGCGGCCGGACGGCGGTGCTCGTTCGGGCGAT
GCGGGCGGCGGATGCGGAGCCGGCGACGTTTTGGACGCCTGCGGCGCCGGTGACGCGCGCGGGGCGCTTGCCGTCGCCGA
GCCGCCCGATGCGCGGCGCGCGCGCGGCGCGCCCGCTTGCCGCCGTCGCGGCGTTCGCGGCGCTCGTCGCCGGCGCGCTG
GCGTTCGCGCCTGCCGCCCATGCCGGCGAGCCGTCCGCCGTCTGCCGGCCGCTCGCCGACGATCCGACCGTATCGCAGTT
CAGCCGCACGCTGCCCGCGCGGCCGGCGCGCATCGTCGTGCTCGAATTCATGTTCGCCGAGGATCTCGCGGCGCTCGACA
TCACGCCGGTCGGCATGGCCGATCCCGCGTATTACCCGATCTGGATCGGCTACGACGATGCGCGGTTCGCGCGCGTGTCC
GACGTCGGCACGCGACAGGAGCCGAGCCTCGAGGCGATCGCGGCCGCGAAGCCGGATCTGATCCTCGGCGTCGGGCTGCG
CCACGCGCCGATCTTCGACGCGCTGTCGCGGATCGCGCCGACCGTGCTGTTCAAGTACAGCCCGAACTACATCGAGGATG
GCCGGCAGGTCACGCAGTACGACTGGGCGCGCGCGATCCTGCGCACGATCGGTTGCCTCACCGGGCGCGCGCGCGACGCG
CGGGCGGTTCAGGCGCGCGTCGACGCGGGGCTCGCCCGCGATGCGCGGCGGATCGCGGCGGCCGGGCGCGCGGGCGAGCG
CGTCGCATGGCTGCAGGAGCTCGGCCTGCCCGATCGCTACTGGGCGTTCACGGGCAACAGCGCGTCGGCGGGCATCGCGC
GCGCGCTCGGCCTCGAGCCGTGGCCGGGCGAGCCGACGCGCGAAGGCACCGCGTACGTGACGTCGGAGGATCTGCTGAAG
CAGCCGGATCTCGCGGTGCTGTTCGTGAGCGCGACCGAGCCGGGCGTGCCGCTCGACGCGAAGCTCGATTCGAGCATCTG
GCGATTCGTGCCGGCGCGCCGGGCGGGGCGGGTCGCGCTCGTCGAGCGCAACATCTGGGGGTTCGGCGGCCCGATGTCGG
CGTTGCGGCTCGCCGACGAGATGACGCAGCGGGTGCTGGCATTGCCGAAGCCCGCGGCCGGCGCGCCGCCGCGGTGA

Upstream 100 bases:

>100_bases
GCCTGCGCAATGAAATTCCCGGAGAAGACCAACTGTGTGGAAGCTGTCCGCTGTTGTTGACGATGTGCGACGACGCGCTC
GCGAAGCAGGACGCCGCGCA

Downstream 100 bases:

>100_bases
TGTCGGCGCGGGCCGTCGGGGCGAGGCGGCGCGCCGGTGGTCGGCTTGACGGCCGCTGTCGCGGCTGATCGGCGATTACC
GATTGCCGAGAAGCGAGAAA

Product: iron compound ABC transporter, periplasmic iron-compound-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTAWARRAARFARLPIGGRTAVLVRAMRAADAEPATFWTPAAPVTRAGRLPSPSRPMRGARAARPLAAVAAFAALVAGAL
AFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVVLEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVS
DVGTRQEPSLEAIAAAKPDLILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEPWPGEPTREGTAYVTSEDLLK
QPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVALVERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR

Sequences:

>Translated_398_residues
MTAWARRAARFARLPIGGRTAVLVRAMRAADAEPATFWTPAAPVTRAGRLPSPSRPMRGARAARPLAAVAAFAALVAGAL
AFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVVLEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVS
DVGTRQEPSLEAIAAAKPDLILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEPWPGEPTREGTAYVTSEDLLK
QPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVALVERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR
>Mature_397_residues
TAWARRAARFARLPIGGRTAVLVRAMRAADAEPATFWTPAAPVTRAGRLPSPSRPMRGARAARPLAAVAAFAALVAGALA
FAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVVLEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVSD
VGTRQEPSLEAIAAAKPDLILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDAR
AVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEPWPGEPTREGTAYVTSEDLLKQ
PDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVALVERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=301, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786346, Length=265, Percent_Identity=29.4339622641509, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 42609; Mature: 42478

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAWARRAARFARLPIGGRTAVLVRAMRAADAEPATFWTPAAPVTRAGRLPSPSRPMRGA
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCCCCH
RAARPLAAVAAFAALVAGALAFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCEEEE
LEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVSDVGTRQEPSLEAIAAAKPDL
EEHHHHHCHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHCCCCE
ILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
EEECCCCCCHHHHHHHHHHHEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCC
WPGEPTREGTAYVTSEDLLKQPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVAL
CCCCCCCCCCEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR
EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TAWARRAARFARLPIGGRTAVLVRAMRAADAEPATFWTPAAPVTRAGRLPSPSRPMRGA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCCCCH
RAARPLAAVAAFAALVAGALAFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCEEEE
LEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVSDVGTRQEPSLEAIAAAKPDL
EEHHHHHCHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHCCCCE
ILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
EEECCCCCCHHHHHHHHHHHEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCC
WPGEPTREGTAYVTSEDLLKQPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVAL
CCCCCCCCCCEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR
EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]