| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is fhuB [H]
Identifier: 237812214
GI number: 237812214
Start: 1897098
End: 1899218
Strand: Direct
Name: fhuB [H]
Synonym: GBP346_A1960
Alternate gene names: 237812214
Gene position: 1897098-1899218 (Clockwise)
Preceding gene: 237812213
Following gene: 237812215
Centisome position: 46.29
GC content: 78.08
Gene sequence:
>2121_bases ATGACGGCGCTCGCGGTTCGCAAGCGGCTGCGTCACGGCGGGCGCGCGCCGGAACCCTCGCCGGCGTCGCGCGCGGCGGC GCCCGGGCGCGTCGGCGCGATCGCGGGCGCGCTCGTCGCGCTGATCGTCGTCACGGCGGCGATGCGGCTCGCGCCCGAGC TGCGCGCGTGGCTTGCCGCGCCGGCGGGCGGCGACGCCGCGCAGCTCGCGCATATCATGCTGTTCGATCTCGCCGCGCCG CGCGTCGCGGCGGCGCTCGTCGCGGGCGGCTGCCTCGCGGCCGCGGGCGCGCTGCTGCAGTCGCTCACGCGCAACCCGCT CGCCGCGCCGGACCTGCTCGGCATCACGGGCGGCGCGCAGCTCGGGCTGATCGCCGCGATGCTCGTGCCCGCGCTCGCCG GCCATGCGTCGGTGCCGCTCCTGTTCGTCTGCGGGCTCGCCGCGGCCGCGTGCGTGTCGGCGGCGGCGGGCGGCTGGCGC GCGACGCCGCTGCGCCTCATTCTCGCGGGCAGCGTCTGCATGCTGCTGTTCTCGGCGGTCACGACGCTGCTGCTCGCGTT CTTCGAGCAGACGGTGGTCGGCGCGTCGCTGTGGGCGAGCGGCAGCCTGTACCAGCCGGGCGCGGCCGGGCTGCGCGACG CGCTGCTGTGGCTCGTCGCGCCGCTCGCCGCGCTGCCGCTCGTGATCCGGCCGCTCGATCCGCTCGCGCTCGGCGACGAC GCCGCGGCCGCGGCTGGCGTGCGCGTCGACGCGACGCGGCTCGCCGGCACCGTCGTCGCGGTCGGCTTCGCGAGCGTCGC GGTCAGCATCGCGGGGCCGCTGTCGTACATCGGCCTGATCGCGCCGAACCTGATCCGGCAGATGCGCGGCGCGAAGGCGT CGAGGCTCGGCGCGCTCGTGCCGCTCGCCGCGCTCGCGGGCGGCGCGCTCGTGCTCGTCACCGATAGCGCCGTGCTCGCG CTCGGCCTCGATGCGACGCTGTCGACGGGCGTCGCGATCGCGTTCGTCGGCACGCCGCTGATGCTCGCGATGATCCGCCG CGGCGCCGCATGGTCGGGCGCCGCGCAGCAGCCGGCGCACGTGCGGGCGGGCACGCGCGGCGGCGCGCGGCTCGTGCGCG CGCTCGCCGTGCTGCCGTGGCCCGCCGTCGCGGTGCTGCTGCTGGCGGCGGGCGCCGCGGTGCTCGTCGTCGGCGCGTCG TTCGGCCCGGTGTGGATCGGCCCCGGGCGCTGGTTCGCGGCGCTCGCGCAGCGCGACGACCTCGCGCGGACGGTGCTCGA TCTGCGCGCGCCGCGGCTCTTGTGCGCATTGCTCGCGGGCGCGCTGCTCGGCGCGTCCGGCGTGCTGATGCAGAGCATCG TGCGCAATCCGCTCGCGGGGCCCGAGGTGCTCGGCGTCACGCAGGGCGCGGGGCTCGCGACGCTCGCCACGCTCGTCGCG TGGCCGCTCGCCGCGCACGGCACGCTCGTCGCCGCCTCGCTCGCGGGCGGCGGCGCGACGCTCGTGCTCACGCTCGCGCT CAACCGCCGGCATCGCTACGCGCCGCTCGCGGTCGCGCTGACGGGCATCGTGATCGGCACGCTGTGGACGACGCTCGCGC AATGGCTGATCACGCAGGAGAGCGTGCAGCCCGCGCGCTTCGTCGTCTGGCTCGTCGGCGGCACGTATGGGCGCAGCTGG GGCGAGGCGGCCGCGCTGCTGCCGTGGGGCGTGCTCGCGGTGCCGGCGCTCGCGCTGCTCGCGCGGCCGCTCGATCTGCT CGCGCTCGGCGACGAACAGGCGGCCGCGCTCGGCCTGCCGATCGCCGCGCTGCGCCCGCTCGTGCTGACGATCGCGACGC TCGCCGCCTGCGCGGCCGTGGCGGCGGTCGGCCCGGTCGGCTTCATCGGGCTGATGGCGCCGCATCTCGCGGCGATGCTC GGCGCGCGCGCGCACGCAACGCGCCTGTGGCTCGCCGCCGCGTGCGGCGCGCTCGTGCTCGCCGCCGCCGATATCGCCGC GCGCACGCTGCTCGCGCCGCGCGAGATTCCGGCGGGCGTGCTGACCGCGCTGATCGGCGCGCCGTACCTGCTCGCGCTGC TGATCGCCGAAGCGCGGCGAGAGCGGCGCGGCGGCCGATGA
Upstream 100 bases:
>100_bases ACGAGGGCGTGCTCGATACCGATCATGCCGATCCGGCGCACGCGGCCGCGCCCGGGGTGCGCGGCGCGGCCGTCGCGCGC GCGCGTCGGGATCTCGCCGC
Downstream 100 bases:
>100_bases GCGCGCGCATGCGCGCGACGCGCTTTTCGACGTTCGCGCCCGCCGCGATCGCGCATTATCTCGAGCACGTGTGGCTCGGT GCGCCCGACGCATGCGACGA
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MTALAVRKRLRHGGRAPEPSPASRAAAPGRVGAIAGALVALIVVTAAMRLAPELRAWLAAPAGGDAAQLAHIMLFDLAAP RVAAALVAGGCLAAAGALLQSLTRNPLAAPDLLGITGGAQLGLIAAMLVPALAGHASVPLLFVCGLAAAACVSAAAGGWR ATPLRLILAGSVCMLLFSAVTTLLLAFFEQTVVGASLWASGSLYQPGAAGLRDALLWLVAPLAALPLVIRPLDPLALGDD AAAAAGVRVDATRLAGTVVAVGFASVAVSIAGPLSYIGLIAPNLIRQMRGAKASRLGALVPLAALAGGALVLVTDSAVLA LGLDATLSTGVAIAFVGTPLMLAMIRRGAAWSGAAQQPAHVRAGTRGGARLVRALAVLPWPAVAVLLLAAGAAVLVVGAS FGPVWIGPGRWFAALAQRDDLARTVLDLRAPRLLCALLAGALLGASGVLMQSIVRNPLAGPEVLGVTQGAGLATLATLVA WPLAAHGTLVAASLAGGGATLVLTLALNRRHRYAPLAVALTGIVIGTLWTTLAQWLITQESVQPARFVVWLVGGTYGRSW GEAAALLPWGVLAVPALALLARPLDLLALGDEQAAALGLPIAALRPLVLTIATLAACAAVAAVGPVGFIGLMAPHLAAML GARAHATRLWLAAACGALVLAAADIAARTLLAPREIPAGVLTALIGAPYLLALLIAEARRERRGGR
Sequences:
>Translated_706_residues MTALAVRKRLRHGGRAPEPSPASRAAAPGRVGAIAGALVALIVVTAAMRLAPELRAWLAAPAGGDAAQLAHIMLFDLAAP RVAAALVAGGCLAAAGALLQSLTRNPLAAPDLLGITGGAQLGLIAAMLVPALAGHASVPLLFVCGLAAAACVSAAAGGWR ATPLRLILAGSVCMLLFSAVTTLLLAFFEQTVVGASLWASGSLYQPGAAGLRDALLWLVAPLAALPLVIRPLDPLALGDD AAAAAGVRVDATRLAGTVVAVGFASVAVSIAGPLSYIGLIAPNLIRQMRGAKASRLGALVPLAALAGGALVLVTDSAVLA LGLDATLSTGVAIAFVGTPLMLAMIRRGAAWSGAAQQPAHVRAGTRGGARLVRALAVLPWPAVAVLLLAAGAAVLVVGAS FGPVWIGPGRWFAALAQRDDLARTVLDLRAPRLLCALLAGALLGASGVLMQSIVRNPLAGPEVLGVTQGAGLATLATLVA WPLAAHGTLVAASLAGGGATLVLTLALNRRHRYAPLAVALTGIVIGTLWTTLAQWLITQESVQPARFVVWLVGGTYGRSW GEAAALLPWGVLAVPALALLARPLDLLALGDEQAAALGLPIAALRPLVLTIATLAACAAVAAVGPVGFIGLMAPHLAAML GARAHATRLWLAAACGALVLAAADIAARTLLAPREIPAGVLTALIGAPYLLALLIAEARRERRGGR >Mature_705_residues TALAVRKRLRHGGRAPEPSPASRAAAPGRVGAIAGALVALIVVTAAMRLAPELRAWLAAPAGGDAAQLAHIMLFDLAAPR VAAALVAGGCLAAAGALLQSLTRNPLAAPDLLGITGGAQLGLIAAMLVPALAGHASVPLLFVCGLAAAACVSAAAGGWRA TPLRLILAGSVCMLLFSAVTTLLLAFFEQTVVGASLWASGSLYQPGAAGLRDALLWLVAPLAALPLVIRPLDPLALGDDA AAAAGVRVDATRLAGTVVAVGFASVAVSIAGPLSYIGLIAPNLIRQMRGAKASRLGALVPLAALAGGALVLVTDSAVLAL GLDATLSTGVAIAFVGTPLMLAMIRRGAAWSGAAQQPAHVRAGTRGGARLVRALAVLPWPAVAVLLLAAGAAVLVVGASF GPVWIGPGRWFAALAQRDDLARTVLDLRAPRLLCALLAGALLGASGVLMQSIVRNPLAGPEVLGVTQGAGLATLATLVAW PLAAHGTLVAASLAGGGATLVLTLALNRRHRYAPLAVALTGIVIGTLWTTLAQWLITQESVQPARFVVWLVGGTYGRSWG EAAALLPWGVLAVPALALLARPLDLLALGDEQAAALGLPIAALRPLVLTIATLAACAAVAAVGPVGFIGLMAPHLAAMLG ARAHATRLWLAAACGALVLAAADIAARTLLAPREIPAGVLTALIGAPYLLALLIAEARRERRGGR
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=655, Percent_Identity=32.5190839694656, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1790740, Length=277, Percent_Identity=38.6281588447653, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1788004, Length=307, Percent_Identity=36.4820846905537, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1786804, Length=287, Percent_Identity=36.2369337979094, Blast_Score=116, Evalue=6e-27, Organism=Escherichia coli, GI1790741, Length=283, Percent_Identity=35.3356890459364, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1786805, Length=298, Percent_Identity=33.2214765100671, Blast_Score=86, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 70616; Mature: 70485
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALAVRKRLRHGGRAPEPSPASRAAAPGRVGAIAGALVALIVVTAAMRLAPELRAWLAA CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAGGDAAQLAHIMLFDLAAPRVAAALVAGGCLAAAGALLQSLTRNPLAAPDLLGITGGAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHH LGLIAAMLVPALAGHASVPLLFVCGLAAAACVSAAAGGWRATPLRLILAGSVCMLLFSAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TTLLLAFFEQTVVGASLWASGSLYQPGAAGLRDALLWLVAPLAALPLVIRPLDPLALGDD HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AAAAAGVRVDATRLAGTVVAVGFASVAVSIAGPLSYIGLIAPNLIRQMRGAKASRLGALV HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PLAALAGGALVLVTDSAVLALGLDATLSTGVAIAFVGTPLMLAMIRRGAAWSGAAQQPAH HHHHHCCCEEEEEECCEEEEECCCHHHHCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCH VRAGTRGGARLVRALAVLPWPAVAVLLLAAGAAVLVVGASFGPVWIGPGRWFAALAQRDD HCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHEEEEECCCCCEEECCHHHHHHHHHHHH LARTVLDLRAPRLLCALLAGALLGASGVLMQSIVRNPLAGPEVLGVTQGAGLATLATLVA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH WPLAAHGTLVAASLAGGGATLVLTLALNRRHRYAPLAVALTGIVIGTLWTTLAQWLITQE HHHHHCCHHEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVQPARFVVWLVGGTYGRSWGEAAALLPWGVLAVPALALLARPLDLLALGDEQAAALGLP CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCC IAALRPLVLTIATLAACAAVAAVGPVGFIGLMAPHLAAMLGARAHATRLWLAAACGALVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AAADIAARTLLAPREIPAGVLTALIGAPYLLALLIAEARRERRGGR HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TALAVRKRLRHGGRAPEPSPASRAAAPGRVGAIAGALVALIVVTAAMRLAPELRAWLAA CHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAGGDAAQLAHIMLFDLAAPRVAAALVAGGCLAAAGALLQSLTRNPLAAPDLLGITGGAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHH LGLIAAMLVPALAGHASVPLLFVCGLAAAACVSAAAGGWRATPLRLILAGSVCMLLFSAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TTLLLAFFEQTVVGASLWASGSLYQPGAAGLRDALLWLVAPLAALPLVIRPLDPLALGDD HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AAAAAGVRVDATRLAGTVVAVGFASVAVSIAGPLSYIGLIAPNLIRQMRGAKASRLGALV HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PLAALAGGALVLVTDSAVLALGLDATLSTGVAIAFVGTPLMLAMIRRGAAWSGAAQQPAH HHHHHCCCEEEEEECCEEEEECCCHHHHCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCH VRAGTRGGARLVRALAVLPWPAVAVLLLAAGAAVLVVGASFGPVWIGPGRWFAALAQRDD HCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHEEEEECCCCCEEECCHHHHHHHHHHHH LARTVLDLRAPRLLCALLAGALLGASGVLMQSIVRNPLAGPEVLGVTQGAGLATLATLVA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH WPLAAHGTLVAASLAGGGATLVLTLALNRRHRYAPLAVALTGIVIGTLWTTLAQWLITQE HHHHHCCHHEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVQPARFVVWLVGGTYGRSWGEAAALLPWGVLAVPALALLARPLDLLALGDEQAAALGLP CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCC IAALRPLVLTIATLAACAAVAAVGPVGFIGLMAPHLAAMLGARAHATRLWLAAACGALVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AAADIAARTLLAPREIPAGVLTALIGAPYLLALLIAEARRERRGGR HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]