BacMap

Definition	Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession	NC_012695
Length	4,098,576

Click here to switch to the map view.

The map label for this gene is rbsA [H]

Identifier: 237812202

GI number: 237812202

Start: 1886773

End: 1888380

Strand: Direct

Name: rbsA [H]

Synonym: GBP346_A1948

Alternate gene names: 237812202

Gene position: 1886773-1888380 (Clockwise)

Preceding gene: 237812201

Following gene: 237812203

Centisome position: 46.03

GC content: 70.09

Gene sequence:

>1608_bases
TTGGTGAGCGGCCCGCGCGACGAGGCCGACGACATGGACGAAGCGAGCGGCGCGGCGCGCGCGCCTGACGAAGCGAGCGA
GGAGGCGATGGACACGATACTGGCGCTCACCGGCATCACGAAGCGGTTTCCCGGCGTCGTCGCGCTGCGCGGAATCGATC
TGCGCGTCGCGCGCGGCGAGATTCACGCGCTGCTCGGCGAGAACGGCGCGGGCAAGTCGACGCTGATGAAGATCCTCTGC
GGGATCCACCCGCCGGACGAGGGCGTGATCGCGCTCGACGGCGAGCCGCGGCGCTTCGCGAACCATCACGACGCGATCGC
GGCGGGCGTCGGCATCGTGTTTCAGGAGTTCAGCCTGATTCCGGAGCTGAACGCGGTCGACAATCTGTTCCTCGGCCGCG
AGTGGCGCGGCCGGCTCGGGCTGCGCGAGCGCGCGCGGATGCGCCGCGCGGCGGCGGACATCTTCGCGCGGCTCGACGTC
GCGATCGATCTGTCGGCGCCGGTGCGCGAGCTGTCGGTCGCGCAGCAGCAGTTCGTCGAGATCGGCAAGGCGCTGTCGCT
CGACGCGCGGCTGCTGATCCTCGACGAGCCGACCGCGACGCTCACGCCCGCCGAAGCCGCGCACCTGTTCGGCGTGATGC
GCGAGCTCAAGCGCCGGGGCGTCGCGATGATCTTCATCTCGCACCACCTCGACGAGATCTTCGAGGTGTGCGACCGGATC
ACCGTGCTGCGCGACGGGCAATACGTCGGCACGACCGAGGTCGCGCGCACCGATGTCGGCGCGCTCGTCGAGATGATGGT
GGGCCGGCGCATCGAGCAGAGCTTTCCGCCGAAGCCGCGTCTTGCGCGCGACGCCGCGCCCGTGCTCGAGGTGGACGCGC
TGCAGGTGCGCGAGAACGGCCCCGTGAACCGCTTCGCGCTGCGCGAGGGCGAGATTCTCGGCTTCGCGGGCCTCGTCGGC
TCCGGGCGCACGTCGAGCGCGCTCGCGCTGATCGGCGCGAAGCCCGCGCGCGTGCGGCGAATGCGCGTGCGCGGCCGCCC
GGTGCGCGTCGCCGATCCCGCCGCCGCGCTCGCCGCGGGCATCGGCCTCCTGCCGGAGAGCCGCAAGACGCAGGGGCTCA
TCCCCGCGTTCTCGATCCGGCACAACATCGCGATCAACAACCTCGGCAAGCACCGCCGGCTGCGCTGGTTCGTCGACGCG
GCGGCCGAGACGCGCATGACGCTCGAGCTGATGCAGCGGCTCGGCGTGAAGGCGCCGACGCCGCACACGCGCGTCGACAC
GCTCTCGGGCGGCAATCAGCAGAAGGTCGTGATCGCGCGCTGGCTCAACCATCACACGCGGATCCTGATCTTCGACGAGC
CGACGCGCGGCATCGACATCGGCGCGAAGGCGGAAATCTATCAACTGATGCGCGAGCTGAGCGCGCGCGGCTATTCGATC
GTGCTGATCTCGAGCGAGTTGCCGGAGATCGTCGGCCTGTGCGATCGCGTCGCGGTGTTCCGGCAGGGCCGTATCGAGGC
GATGCTCGAAGGCGAGGCGATCGAGCCGAACACGGTGATGACCTATGCCACTTCCGACGTACGCGGAGCGAATCATGAAC
ATGCATGA

Upstream 100 bases:

>100_bases
CGATCGGCATCGGGCTCGCGAAGAAGTGGGGCGCCAATGTGCCGAAGGCGATTCCGGTCGACGTGAAGCGGATCGACAAG
GGCAACGCGAAGACGTTCAG

Downstream 100 bases:

>100_bases
CCGGACGGCCGCGCCGTCTGCCTCTTGCGCGCCCGCCGCCGCGAGCCCCGCTCGGGCCACGGGCCCCGCGCGCGCCGCGC
ACGCGCTCGCCGCGCTGCGG

Product: ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MVSGPRDEADDMDEASGAARAPDEASEEAMDTILALTGITKRFPGVVALRGIDLRVARGEIHALLGENGAGKSTLMKILC
GIHPPDEGVIALDGEPRRFANHHDAIAAGVGIVFQEFSLIPELNAVDNLFLGREWRGRLGLRERARMRRAAADIFARLDV
AIDLSAPVRELSVAQQQFVEIGKALSLDARLLILDEPTATLTPAEAAHLFGVMRELKRRGVAMIFISHHLDEIFEVCDRI
TVLRDGQYVGTTEVARTDVGALVEMMVGRRIEQSFPPKPRLARDAAPVLEVDALQVRENGPVNRFALREGEILGFAGLVG
SGRTSSALALIGAKPARVRRMRVRGRPVRVADPAAALAAGIGLLPESRKTQGLIPAFSIRHNIAINNLGKHRRLRWFVDA
AAETRMTLELMQRLGVKAPTPHTRVDTLSGGNQQKVVIARWLNHHTRILIFDEPTRGIDIGAKAEIYQLMRELSARGYSI
VLISSELPEIVGLCDRVAVFRQGRIEAMLEGEAIEPNTVMTYATSDVRGANHEHA

Sequences:

>Translated_535_residues
MVSGPRDEADDMDEASGAARAPDEASEEAMDTILALTGITKRFPGVVALRGIDLRVARGEIHALLGENGAGKSTLMKILC
GIHPPDEGVIALDGEPRRFANHHDAIAAGVGIVFQEFSLIPELNAVDNLFLGREWRGRLGLRERARMRRAAADIFARLDV
AIDLSAPVRELSVAQQQFVEIGKALSLDARLLILDEPTATLTPAEAAHLFGVMRELKRRGVAMIFISHHLDEIFEVCDRI
TVLRDGQYVGTTEVARTDVGALVEMMVGRRIEQSFPPKPRLARDAAPVLEVDALQVRENGPVNRFALREGEILGFAGLVG
SGRTSSALALIGAKPARVRRMRVRGRPVRVADPAAALAAGIGLLPESRKTQGLIPAFSIRHNIAINNLGKHRRLRWFVDA
AAETRMTLELMQRLGVKAPTPHTRVDTLSGGNQQKVVIARWLNHHTRILIFDEPTRGIDIGAKAEIYQLMRELSARGYSI
VLISSELPEIVGLCDRVAVFRQGRIEAMLEGEAIEPNTVMTYATSDVRGANHEHA
>Mature_535_residues
MVSGPRDEADDMDEASGAARAPDEASEEAMDTILALTGITKRFPGVVALRGIDLRVARGEIHALLGENGAGKSTLMKILC
GIHPPDEGVIALDGEPRRFANHHDAIAAGVGIVFQEFSLIPELNAVDNLFLGREWRGRLGLRERARMRRAAADIFARLDV
AIDLSAPVRELSVAQQQFVEIGKALSLDARLLILDEPTATLTPAEAAHLFGVMRELKRRGVAMIFISHHLDEIFEVCDRI
TVLRDGQYVGTTEVARTDVGALVEMMVGRRIEQSFPPKPRLARDAAPVLEVDALQVRENGPVNRFALREGEILGFAGLVG
SGRTSSALALIGAKPARVRRMRVRGRPVRVADPAAALAAGIGLLPESRKTQGLIPAFSIRHNIAINNLGKHRRLRWFVDA
AAETRMTLELMQRLGVKAPTPHTRVDTLSGGNQQKVVIARWLNHHTRILIFDEPTRGIDIGAKAEIYQLMRELSARGYSI
VLISSELPEIVGLCDRVAVFRQGRIEAMLEGEAIEPNTVMTYATSDVRGANHEHA

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]

COG id: COG1129

COG function: function code G; ABC-type sugar transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=237, Percent_Identity=27.0042194092827, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=28.310502283105, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI150417984, Length=226, Percent_Identity=29.646017699115, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI153792144, Length=217, Percent_Identity=27.6497695852535, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI105990541, Length=207, Percent_Identity=28.9855072463768, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=27.1889400921659, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=27.1889400921659, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI47078218, Length=258, Percent_Identity=26.7441860465116, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI45446740, Length=258, Percent_Identity=26.7441860465116, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI27436953, Length=231, Percent_Identity=26.8398268398268, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI27477115, Length=230, Percent_Identity=28.2608695652174, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI255708477, Length=277, Percent_Identity=27.4368231046931, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI42741659, Length=232, Percent_Identity=28.448275862069, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI27881501, Length=260, Percent_Identity=24.6153846153846, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI30795238, Length=260, Percent_Identity=24.6153846153846, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI9961252, Length=202, Percent_Identity=30.6930693069307, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI116734710, Length=261, Percent_Identity=26.8199233716475, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI4505771, Length=202, Percent_Identity=30.6930693069307, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI9961250, Length=202, Percent_Identity=30.6930693069307, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI46592964, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI46592956, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI46592915, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI46592978, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI46592971, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI46592898, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI6005701, Length=229, Percent_Identity=28.3842794759825, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1790190, Length=507, Percent_Identity=41.4201183431953, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1788472, Length=496, Percent_Identity=39.1129032258064, Blast_Score=374, Evalue=1e-104,
Organism=Escherichia coli, GI1789991, Length=506, Percent_Identity=41.1067193675889, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1790525, Length=501, Percent_Identity=39.9201596806387, Blast_Score=368, Evalue=1e-103,
Organism=Escherichia coli, GI48995001, Length=472, Percent_Identity=43.0084745762712, Blast_Score=364, Evalue=1e-101,
Organism=Escherichia coli, GI1788210, Length=501, Percent_Identity=38.3233532934132, Blast_Score=352, Evalue=4e-98,
Organism=Escherichia coli, GI1788897, Length=471, Percent_Identity=39.4904458598726, Blast_Score=313, Evalue=3e-86,
Organism=Escherichia coli, GI1787792, Length=506, Percent_Identity=36.9565217391304, Blast_Score=288, Evalue=7e-79,
Organism=Escherichia coli, GI1788506, Length=519, Percent_Identity=27.9383429672447, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI48994943, Length=490, Percent_Identity=23.8775510204082, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=29.3577981651376, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1790544, Length=239, Percent_Identity=30.9623430962343, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI87081709, Length=219, Percent_Identity=28.310502283105, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1786319, Length=272, Percent_Identity=29.7794117647059, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=26.7857142857143, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=30.3964757709251, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1786345, Length=260, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI87081782, Length=227, Percent_Identity=30.8370044052863, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1786703, Length=204, Percent_Identity=34.3137254901961, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=29.8165137614679, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI145693107, Length=525, Percent_Identity=25.5238095238095, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=30.2631578947368, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=26.8181818181818, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789864, Length=240, Percent_Identity=27.5, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=27.0833333333333, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=32.4074074074074, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=29.9065420560748, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787712, Length=218, Percent_Identity=25.6880733944954, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI87082268, Length=217, Percent_Identity=27.6497695852535, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1789873, Length=205, Percent_Identity=32.1951219512195, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787105, Length=228, Percent_Identity=28.9473684210526, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1789032, Length=225, Percent_Identity=28, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1789593, Length=216, Percent_Identity=27.3148148148148, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=221, Percent_Identity=28.9592760180996, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787758, Length=236, Percent_Identity=30.9322033898305, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082267, Length=240, Percent_Identity=27.9166666666667, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=28.3842794759825, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1787143, Length=218, Percent_Identity=31.651376146789, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786654, Length=212, Percent_Identity=31.6037735849057, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787548, Length=233, Percent_Identity=29.6137339055794, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788165, Length=231, Percent_Identity=29.004329004329, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786563, Length=215, Percent_Identity=26.5116279069767, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790162, Length=221, Percent_Identity=27.1493212669683, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786253, Length=204, Percent_Identity=28.4313725490196, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789963, Length=250, Percent_Identity=27.2, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787547, Length=232, Percent_Identity=25, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788644, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790739, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787500, Length=211, Percent_Identity=27.0142180094787, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787164, Length=226, Percent_Identity=25.6637168141593, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786981, Length=198, Percent_Identity=32.8282828282828, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786803, Length=221, Percent_Identity=24.8868778280543, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1788450, Length=222, Percent_Identity=24.7747747747748, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787759, Length=247, Percent_Identity=29.1497975708502, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789586, Length=207, Percent_Identity=27.0531400966184, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1790534, Length=201, Percent_Identity=31.3432835820896, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1788540, Length=200, Percent_Identity=28, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=257, Percent_Identity=24.5136186770428, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=250, Percent_Identity=26.4, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17565586, Length=242, Percent_Identity=23.1404958677686, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=269, Percent_Identity=27.5092936802974, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=269, Percent_Identity=27.5092936802974, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=269, Percent_Identity=27.5092936802974, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=231, Percent_Identity=29.004329004329, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=236, Percent_Identity=28.3898305084746, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=209, Percent_Identity=31.5789473684211, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24643674, Length=224, Percent_Identity=24.5535714285714, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221500365, Length=220, Percent_Identity=28.1818181818182, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007184, Length=220, Percent_Identity=28.1818181818182, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666092, Length=214, Percent_Identity=26.6355140186916, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI221512771, Length=231, Percent_Identity=24.6753246753247, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI17136662, Length=218, Percent_Identity=31.1926605504587, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363262, Length=217, Percent_Identity=29.4930875576037, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573571, Length=249, Percent_Identity=24.8995983935743, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28573573, Length=216, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24653245, Length=217, Percent_Identity=29.4930875576037, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007328, Length=256, Percent_Identity=23.4375, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574150, Length=256, Percent_Identity=23.4375, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24659289, Length=215, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 58465; Mature: 58465

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSGPRDEADDMDEASGAARAPDEASEEAMDTILALTGITKRFPGVVALRGIDLRVARGE
CCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCH
IHALLGENGAGKSTLMKILCGIHPPDEGVIALDGEPRRFANHHDAIAAGVGIVFQEFSLI
HHHEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHC
PELNAVDNLFLGREWRGRLGLRERARMRRAAADIFARLDVAIDLSAPVRELSVAQQQFVE
CCCCHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH
IGKALSLDARLLILDEPTATLTPAEAAHLFGVMRELKRRGVAMIFISHHLDEIFEVCDRI
HHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
TVLRDGQYVGTTEVARTDVGALVEMMVGRRIEQSFPPKPRLARDAAPVLEVDALQVRENG
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC
PVNRFALREGEILGFAGLVGSGRTSSALALIGAKPARVRRMRVRGRPVRVADPAAALAAG
CCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHH
IGLLPESRKTQGLIPAFSIRHNIAINNLGKHRRLRWFVDAAAETRMTLELMQRLGVKAPT
CCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC
PHTRVDTLSGGNQQKVVIARWLNHHTRILIFDEPTRGIDIGAKAEIYQLMRELSARGYSI
CCCCEEECCCCCCCEEHHEEHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEE
VLISSELPEIVGLCDRVAVFRQGRIEAMLEGEAIEPNTVMTYATSDVRGANHEHA
EEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MVSGPRDEADDMDEASGAARAPDEASEEAMDTILALTGITKRFPGVVALRGIDLRVARGE
CCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCH
IHALLGENGAGKSTLMKILCGIHPPDEGVIALDGEPRRFANHHDAIAAGVGIVFQEFSLI
HHHEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHC
PELNAVDNLFLGREWRGRLGLRERARMRRAAADIFARLDVAIDLSAPVRELSVAQQQFVE
CCCCHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH
IGKALSLDARLLILDEPTATLTPAEAAHLFGVMRELKRRGVAMIFISHHLDEIFEVCDRI
HHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
TVLRDGQYVGTTEVARTDVGALVEMMVGRRIEQSFPPKPRLARDAAPVLEVDALQVRENG
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC
PVNRFALREGEILGFAGLVGSGRTSSALALIGAKPARVRRMRVRGRPVRVADPAAALAAG
CCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHH
IGLLPESRKTQGLIPAFSIRHNIAINNLGKHRRLRWFVDAAAETRMTLELMQRLGVKAPT
CCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC
PHTRVDTLSGGNQQKVVIARWLNHHTRILIFDEPTRGIDIGAKAEIYQLMRELSARGYSI
CCCCEEECCCCCCCEEHHEEHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEE
VLISSELPEIVGLCDRVAVFRQGRIEAMLEGEAIEPNTVMTYATSDVRGANHEHA
EEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA