| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812176
Identifier: 237812176
GI number: 237812176
Start: 1862447
End: 1862683
Strand: Direct
Name: 237812176
Synonym: GBP346_A1922
Alternate gene names: NA
Gene position: 1862447-1862683 (Clockwise)
Preceding gene: 237812175
Following gene: 237812177
Centisome position: 45.44
GC content: 71.31
Gene sequence:
>237_bases ATGACGGCACGTACGCTTGCCGCATCGCATGCGATGCCGTGCGGGATGCTCGCGCGAAACGCGGCGCGCGCATCGGCGCG GGCGGCATGCGCTTCGCATATACACGCGCCGCGGGCACGGCGCGAAGGGGCGGGCGGCACGCGCGCGAACGACGCGATAC GCGGCGCGCAATCACGCAACAAGCAATCACGCGACAAGCAATCTGCGGCCGCCCGCGCGGGCGGCCCGAAGCAATGA
Upstream 100 bases:
>100_bases ACCCCGCGCCGAACGTGCGCGGCGATGCGCGAGGCGTCGGGCGCGCGATGCCGCGCCCGACGGGGGCTCGCGCGGCATCG GACGCGTGCATCACGCGTGC
Downstream 100 bases:
>100_bases GATGGACGCCTGGCTCGCTCCCAAATATCTGATGTGGTTATGGCAGGGCTTCCTGCTGACGCTCGGCCTGTCGCTCGCGG CGGCCGTCACGGCGACGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTARTLAASHAMPCGMLARNAARASARAACASHIHAPRARREGAGGTRANDAIRGAQSRNKQSRDKQSAAARAGGPKQ
Sequences:
>Translated_78_residues MTARTLAASHAMPCGMLARNAARASARAACASHIHAPRARREGAGGTRANDAIRGAQSRNKQSRDKQSAAARAGGPKQ >Mature_77_residues TARTLAASHAMPCGMLARNAARASARAACASHIHAPRARREGAGGTRANDAIRGAQSRNKQSRDKQSAAARAGGPKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8035; Mature: 7904
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARTLAASHAMPCGMLARNAARASARAACASHIHAPRARREGAGGTRANDAIRGAQSRN CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHCHHHCC KQSRDKQSAAARAGGPKQ HHHHHHHHHHHCCCCCCC >Mature Secondary Structure TARTLAASHAMPCGMLARNAARASARAACASHIHAPRARREGAGGTRANDAIRGAQSRN CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHCHHHCC KQSRDKQSAAARAGGPKQ HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA