Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is tap [H]

Identifier: 237812092

GI number: 237812092

Start: 1785434

End: 1787146

Strand: Direct

Name: tap [H]

Synonym: GBP346_A1834

Alternate gene names: 237812092

Gene position: 1785434-1787146 (Clockwise)

Preceding gene: 237812088

Following gene: 237812093

Centisome position: 43.56

GC content: 65.97

Gene sequence:

>1713_bases
GTGGGCTTTTTGAACACCTTTTCGTTGCGCAGATACGCCTCCCTGCTGCTGGGCCTGCTCGCCGTAGCGGCCGTTGCGAT
AGGCCTATGCCAGTGGCGGCTCGATGCCGCGAATCACCGCGTCGCGCAGGCCTACCAGCAGCGCTATGTGTCGACCCAGC
TCGCGAACGAACTGCGCCGCAGCTCCGACGATTTGACCCGGCTTGCGCGCACCTATGTCGCGACGGGCGACGCGAAATGG
GAGCAGCAATACAACGAGATACTCGCGATTCGCTCGGGCAAGGCGCCGCGCCCGCTCGATTACGATCGTATTTACTGGGA
CTTTCGCGCGGCCGACGAACCGCTGCGCGCGGAGCAGGGCGAGACGATCTCGCTGCAGGAGATGATGAAGCGCGCCGGCT
TCACCGACGAGGAGTTCGCGAAGCTGCACGACGCCGAGCAGAACTCGAATGATCTCGTGAAGACCGAGACGGTCGCGATG
AATCTCGTCAAAGGGCTGACGCCCGACGACGCAGGCCATTTCACGAAGCAAGGCCCGCCCGATCTCGAGAAGGCGCGGGC
CCTGATGTTCGACGCGAACTACCACCGGTTCAAGGCGAAGATCATGCATCCCATCGACGATTTCCTGAAGCTGCTCGACG
CGCGCACCGAAGGCGCGATCGCCCGCGCGCAGGCAAGCGCGCAAACGTGGAAGATCATTTCGGCCGCAGTGGCGATCGGC
ATCCTCGCTTTCTTCGCGCTGATGCTGCACATGATGTTCAAGCGCGTGCTCGCCGGGCTCGAGGCGGCCGCCTCGACCGC
GAGCCGCGTCGCCGCGGGCGATCTGACCTCTCATTTCGACGCGCACCGCGTCGACCCGCAGGCGAAGGACGAGATTTCCC
GCGTGATGCGCGCGCTGCAGACGATGAACGACGGGCTCGTGCGCATCGTGACCGACGTGCGCTCGGGCACCGATACGATC
GCGACGGCGTCCCACGAAATCATGGCCGGCAACAACGATCTGTCCGCGCGAACCGAGCAGCAGGCCGCGTCGCTGCAGGA
AACGGCCGCGAGCATGAGCGAGCTCACCGCGACCGTGAAGCTGAACCTCGAGAACGCGCGGCAGGCGAACATGATCGGCT
CCAACGCGGTGTCGACGGTCGAGAAGGGCTCGGTCTCGGTCGAGCAACTCGTCACCACGGTCAACGCGATCAGCACGAAC
TCGGGCAAGATCGCCGACATCATCTCGCTGATCGAGGGCATTGCGTTCCAGACGAACATCCTTGCGCTGAACGCCGCCGT
CGAGGCGGCGCGCGCGGGCGAGCAGGGCCGTGGCTTCGCCGTCGTCGCGAGCGAAGTGCGCAGTCTCGCCCAGCGCTCGT
CGTCGGCGGCCAAGGAGATCAAGGATCTCATCGAGACGTCGATCGATACGGTTCGGGACGGCGTGTCGAAGGCCGACGAG
GTCGGGCAGCACATCGTGGAGGTGAAGCAGGCGATCCGGCGCGTCGCCGATCTCGTCGGCGAGATCACCGCGGCGTCGGA
AGAGCAAACCCGCGGCATCGAGCAGGTCGATGCCGCCGTCAGCCAGATGGACCGCGTGACGCAGCAAAACGCGGCCCTCG
TCGAGCAGGCCGCGGCCGCGTCGAAGGCGATGGACGATCAGGCCGGCAACCTGCGCGCGGCGGCGTCGATCTTCAAGCTG
CCCGGGCGCGCGAGCCTGTTCGCGCACGCGTAG

Upstream 100 bases:

>100_bases
TTGCTACGGAATTGCCGCATTAGGAGTGCCACTTATTCAGCGTGCTTCCTCGCGGCCGATATACAGCGGACGACGCGTCG
CACTCAAACCGGAGAACACC

Downstream 100 bases:

>100_bases
ACCGGCTTTCGCCGACGGGATCGGCAACGCGAGGGCGGGGCATGCGCGTGTGCCGCCGGCTGCCGGCGTGGCCGGATCAA
GGCAATCAACCGACGCGAGG

Product: methyl-accepting chemotaxis domain protein

Products: NA

Alternate protein names: MCP-IV; Dipeptide chemoreceptor protein [H]

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MGFLNTFSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKW
EQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAM
NLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIG
ILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTI
ATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTN
SGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADE
VGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL
PGRASLFAHA

Sequences:

>Translated_570_residues
MGFLNTFSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKW
EQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAM
NLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIG
ILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTI
ATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTN
SGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADE
VGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL
PGRASLFAHA
>Mature_569_residues
GFLNTFSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWE
QQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAMN
LVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIGI
LAFFALMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIA
TASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTNS
GKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADEV
GQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKLP
GRASLFAHA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=46.3611859838275, Blast_Score=290, Evalue=2e-79,
Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=50.5917159763314, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI1787690, Length=390, Percent_Identity=44.3589743589744, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788195, Length=291, Percent_Identity=53.2646048109966, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1789453, Length=334, Percent_Identity=33.2335329341317, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 61697; Mature: 61566

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLNTFSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEHHCCCCCCCCCCC
ETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAMNLVKGLTPDDAGHFTKQGPP
CEECHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DLEKARALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIG
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHH
TMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVK
HHCCCHHHHHHHHCCCCCHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEE
LNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTNSGKIADIISLIEGIAFQTNI
EECCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKAMDDQAGNLRAAASIFKLPGRASLFAHA
HHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GFLNTFSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEHHCCCCCCCCCCC
ETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAMNLVKGLTPDDAGHFTKQGPP
CEECHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DLEKARALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIG
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHH
TMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVK
HHCCCHHHHHHHHCCCCCHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEE
LNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTNSGKIADIISLIEGIAFQTNI
EECCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKAMDDQAGNLRAAASIFKLPGRASLFAHA
HHHHCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6305515; 9097040; 9278503 [H]