| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812080
Identifier: 237812080
GI number: 237812080
Start: 1772271
End: 1773269
Strand: Reverse
Name: 237812080
Synonym: GBP346_A1821
Alternate gene names: NA
Gene position: 1773269-1772271 (Counterclockwise)
Preceding gene: 237812081
Following gene: 237812077
Centisome position: 43.27
GC content: 66.27
Gene sequence:
>999_bases ATGACAACAAGATTCTCGATCGCGTTCTGGGAGGAATGCATGTCGCACACGTTACCGCTGCACCCGTCTTCGTCGTCGCG AACCCGATTCGCGCGGCGCCGCCTCGCCACCGCGTCGGCCGCGCTCTCGCTCATGCTCGGCCACGGCGCCGCACATGCGC AGGCCAACGCCGAGGCGTCCGCCGCGGTCGAGTCCGGCGCGCAGGAGGCGACGCTTCCCGCCGAGCTCGCGAAGGTCGCG AAGCTCCCCGTCGAGCAGCAGGCACGCTGGCTGCGCACGGCCGCGCGCCAGGGCACGCTCGAAAAGCTCGACGACGCGAC GCTCACCGCGCTCTTCAAGTCGCTCGATCCGCAGACCGTGCCGGATTACGTCGCGGCGGGGCCGATCGGCCATCCGTCGT ACGAATTCACGATGCTGCGCCAGGAGCGCATCAGCGGCAAATGGTCGGATACGCCCGATCACATGCTCGTCAAGGTGACG CGCAGCCCGCTGCGCGTCTATGCGAAGTGGCTGCCGGACGGCGCGCACTCGGGCCAGGAAGTGATCTACGATTCCTCCAA GCGCGCCGACGAAATGTACGGCCACTTGGGCGGCCTGCTCGGCAAGGTGCCGATGTGGACGGCCGTCGACGGCACGCTCG CGCGCGCGCAGTCGAACCACCAGGTGCGCGATCTCGGCACGGAGTTCGTCGCGAACCTGTATCTGACCGAGGCGAAGAAG TACCGCGAAGCGGGCGCGCTGAAGCCGACGCACGTCGAGGCGAAGACAGTCAAGGGGGGGCGCGTCGTCGCCCTCACCTA CGAGACGCCCGGCGGCCGGCCGCAGTTCTACGCGAAAAAGGAAACGCTCGGGCTCGATCTGCGGCAGCCATATTTCCGCA CCGTCGAGTCGTACGACAACGACGGGCGCGTGTTCGAGAAAATCGTGTTCGAGAAGATCACGCCGAAATCGCTCGACGAA ACGGCGTTCGATCCGAAGAATCCCGATTACAAATTCTGA
Upstream 100 bases:
>100_bases AGATCCTGCGCCGCGCGCTGCGCGACGAGGAACTCGCGAAGCTCGCGAACGCGCCCGCCGATCCGCACGCGAAGCACTGA TCCGGGCGAACCGCGCAAGC
Downstream 100 bases:
>100_bases GCGGTCATCGTCGCGTCATGCTCGACGCGCGTGACCGGCGCGCCGGCGACGCCGTCGGGCGGCGATGAAAAACGCCGCGC GGCCTTCATCGCACGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEASAAVESGAQEATLPAELAKVA KLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTVPDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVT RSPLRVYAKWLPDGAHSGQEVIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK YREAGALKPTHVEAKTVKGGRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDNDGRVFEKIVFEKITPKSLDE TAFDPKNPDYKF
Sequences:
>Translated_332_residues MTTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEASAAVESGAQEATLPAELAKVA KLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTVPDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVT RSPLRVYAKWLPDGAHSGQEVIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK YREAGALKPTHVEAKTVKGGRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDNDGRVFEKIVFEKITPKSLDE TAFDPKNPDYKF >Mature_331_residues TTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEASAAVESGAQEATLPAELAKVAK LPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTVPDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVTR SPLRVYAKWLPDGAHSGQEVIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKKY REAGALKPTHVEAKTVKGGRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDNDGRVFEKIVFEKITPKSLDET AFDPKNPDYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36783; Mature: 36652
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEAS CCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH AAVESGAQEATLPAELAKVAKLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTV HHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC PDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVTRSPLRVYAKWLPDGAHSGQE CHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC VIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK EEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YREAGALKPTHVEAKTVKGGRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDN HHHHCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEECHHHCCCCCCCHHHHHHHCCCC DGRVFEKIVFEKITPKSLDETAFDPKNPDYKF CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEAS CCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH AAVESGAQEATLPAELAKVAKLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTV HHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC PDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVTRSPLRVYAKWLPDGAHSGQE CHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC VIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK EEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YREAGALKPTHVEAKTVKGGRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDN HHHHCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEECHHHCCCCCCCHHHHHHHCCCC DGRVFEKIVFEKITPKSLDETAFDPKNPDYKF CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA