| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812076
Identifier: 237812076
GI number: 237812076
Start: 1770022
End: 1770735
Strand: Direct
Name: 237812076
Synonym: GBP346_A1818
Alternate gene names: NA
Gene position: 1770022-1770735 (Clockwise)
Preceding gene: 237812075
Following gene: 237812078
Centisome position: 43.19
GC content: 68.63
Gene sequence:
>714_bases ATGGGGCGCGTCTTCGTCGCGATCGCGGCGGCGGGCGGCCTCTGCGGTGCGCATGCGCAGGCATTGGAAGGCAACGGCGG CGCGGCGTCGCCGGCGCTGACGGCATCCGGCGCCGCGGCGTCGCCGGGTGTTTCGGCGCCGGCTGTCGTCAATCTGTCGG CGCCCGCCGGCGCGCCGGCGGCGGGCGCGAGCGCGGAGGCGGGCGGCAAGAGCACGATCGACGAATTGCAGCGCCAGATC CAGGCACGCGAGCTCACCGAAATGCGCACGACGTACAACGGCAGCTATGGCGCGAGCCTGCTGCTCAACATCCAGGAAGG CACGTATTTTGTCGCGCTGTTCCAGCAAAAGGCATTCTGGCGCGTGATCAGGACGGCGAGCGAAGCGCGCGCGGAGGCGG TTTACCGCGATTTCGCGAAGCAATCGGAGACGCTTGCGGTCAACGAGTTGCAGGCCGCGAAGCTCGAATCGCAGAAGGCG CTGACCGATCGGCAGATCGCCGTTGCCCAGGAGCGGGCGAGCCGGCTACAGGCGGATCTGAGCATTGCGCGTGAGCAGCG GGCGGCTGTCGCGACCCGGCAGAAGGACAAGCTCGACGAGACCGTCGCGCTGCGGGAGCAGAAAAGCGAGCGGCAGGATC AACTGCGCAAGCTGCAGCAGCAGGTGCGTTCGCTGCAACGGCAGGCCGAAGCGGGATTGCCGAAGGGACGGTGA
Upstream 100 bases:
>100_bases AAGCGAATGAAAGCAGGCGGCGAGCCGGCCGACGAACAGGCATTCGAAAAACTACAACACATCGAAGCAGGAAAAAAACG GAATGAGCCACATACGGGGA
Downstream 100 bases:
>100_bases TCGCACCGCGGACGGGGCGGGATCGGACGATCCCGCTCTCGATCCCGCTTTGCGCGGCTCCGGGATTCGCGATGGCGCTG CGCTGCGCGCTCAGGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MGRVFVAIAAAGGLCGAHAQALEGNGGAASPALTASGAAASPGVSAPAVVNLSAPAGAPAAGASAEAGGKSTIDELQRQI QARELTEMRTTYNGSYGASLLLNIQEGTYFVALFQQKAFWRVIRTASEARAEAVYRDFAKQSETLAVNELQAAKLESQKA LTDRQIAVAQERASRLQADLSIAREQRAAVATRQKDKLDETVALREQKSERQDQLRKLQQQVRSLQRQAEAGLPKGR
Sequences:
>Translated_237_residues MGRVFVAIAAAGGLCGAHAQALEGNGGAASPALTASGAAASPGVSAPAVVNLSAPAGAPAAGASAEAGGKSTIDELQRQI QARELTEMRTTYNGSYGASLLLNIQEGTYFVALFQQKAFWRVIRTASEARAEAVYRDFAKQSETLAVNELQAAKLESQKA LTDRQIAVAQERASRLQADLSIAREQRAAVATRQKDKLDETVALREQKSERQDQLRKLQQQVRSLQRQAEAGLPKGR >Mature_236_residues GRVFVAIAAAGGLCGAHAQALEGNGGAASPALTASGAAASPGVSAPAVVNLSAPAGAPAAGASAEAGGKSTIDELQRQIQ ARELTEMRTTYNGSYGASLLLNIQEGTYFVALFQQKAFWRVIRTASEARAEAVYRDFAKQSETLAVNELQAAKLESQKAL TDRQIAVAQERASRLQADLSIAREQRAAVATRQKDKLDETVALREQKSERQDQLRKLQQQVRSLQRQAEAGLPKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25116; Mature: 24985
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVFVAIAAAGGLCGAHAQALEGNGGAASPALTASGAAASPGVSAPAVVNLSAPAGAPA CCEEEEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC AGASAEAGGKSTIDELQRQIQARELTEMRTTYNGSYGASLLLNIQEGTYFVALFQQKAFW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEHHHHHHHH RVIRTASEARAEAVYRDFAKQSETLAVNELQAAKLESQKALTDRQIAVAQERASRLQADL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIAREQRAAVATRQKDKLDETVALREQKSERQDQLRKLQQQVRSLQRQAEAGLPKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GRVFVAIAAAGGLCGAHAQALEGNGGAASPALTASGAAASPGVSAPAVVNLSAPAGAPA CEEEEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC AGASAEAGGKSTIDELQRQIQARELTEMRTTYNGSYGASLLLNIQEGTYFVALFQQKAFW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEHHHHHHHH RVIRTASEARAEAVYRDFAKQSETLAVNELQAAKLESQKALTDRQIAVAQERASRLQADL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIAREQRAAVATRQKDKLDETVALREQKSERQDQLRKLQQQVRSLQRQAEAGLPKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA