Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812074

Identifier: 237812074

GI number: 237812074

Start: 1766715

End: 1768523

Strand: Direct

Name: 237812074

Synonym: GBP346_A1816

Alternate gene names: NA

Gene position: 1766715-1768523 (Clockwise)

Preceding gene: 237812073

Following gene: 237812075

Centisome position: 43.11

GC content: 71.14

Gene sequence:

>1809_bases
ATGCCGTTAGCCCGCCGCCGCGCCGAGCGCCGCCCGCCCGCCCGCGGGCGCGGGCCGATCGCGCGCGAGCGCGGCTCGTT
CGCGGTCGTCGCGGCGATCTGGATGCTGGTCGCCATCGCCGCGCTCGGCGCGGTCGACATCGGCAACGTGTTCTTCGTGC
GGCGCGACTTGCAGCGGGTCGCCGACATGGCCGCGCTCGCCGGCGCGCAGAGAATGGACGATCAGTGCGCGCAGCCGAAC
GCGGCGGCCGCCGCGAACGCGCGCTCGAACGGCTTCGATCCGGCGGCGGGCGGCAACACGCTCGCGCTCGCGTGCGGGCG
CTGGGATACGCAAAGCAACGCGGGGCCGAGCTACTTCAACGCGGCCGCGACGCCGCTCAACGCGGTGCAGGTGACGGCCA
CGCAGAGCGTGCCGTATTTCTTCCTGGGCCCATCGCGCACGGTGAGCGCGACGTCGACCGCGAAGGCGACCAACGTCGAC
CAGTTCACGATCGGCACGACGCTCGCGAGCCTGCAGGGCGGCCTCGTGAACAATGTGCTCAATGCGTTGCTCGGCACGAA
CCTGGGTTTGAGCGCGCTGTCGTATCAGGCGCTCGCGTCGACGCAGATCAAGATCGGCGACCTGATGGCGGCCGCGAACG
TGCTGACCGTCAACGAGCTGCTCGCGACGCAGGTGACGGCCGGACAGTACGCGCAACTGATGCTGACCGCGCTGTCGCGC
ACGCAGGTCGTGAACGCGAATCTGCAGGCGAGCGTCGCCGCGCTGCAGGCGATCGCCGGCGCGCATCTCGGCGGCGGGAC
ATTCAGGCTCGGCGGCCAGCCGGGCGCGCCCGGCGTGTTCGCGCTCGGGCTGTCCGACACGCAGGCGGCCGCCGACGCGA
AGATCAACGTGTTCGACGCGCTGATGGTCGCGGCCGAAGTCGCGGCGGCGGGCAAGCCGGCCGTCGACGTCGCGACGGGG
CTGCAGCTCGCGGGCCAGGGCGCGAGGCTGAAGCTGCAGGTCATCGAGCCGCCGACGATCGTGATCGGCGAGGCGGGCAC
GGACCCGAAGACGGGCGCGTGGCGCACGCAGGCGAACAATGCGCAGATTCGGTTGTATGTGAGCGTCGATCTCGGCACGA
CGGGCTTGTCGCCCACCGGCGTGCTGCTGCCGATCGCGCCGCTCGTGAGCCTCGTGCAGAACCTGATCCAGGTCGATCTG
AGCCTGCCGCTCACGCTGCAGGTCGCGACGGGCTCCGCGTGGCTGCAGTCGACGAGCTGCGCGGCGAGCGCCGCCGCGAG
CCGCGCGACGCTCGGCGTGCAGCCGGGCCTCGCGAACCTGTGCATCGGCGACGTGCCGACGGATCTCCCCGCGCAGCAGA
CATTCGCCTGCAACGTGCCCGCGACGCTCGCGACGCTCGGCGTGCTGAGCGCGCCGCTGCTGCAGGTCAAGTCGGCCGTC
GCGCTGCCGGCGGTCGTGCCGAAGGCGAGCGCGGCGACGCTCACGTTCAACGGCGTGGCGGGCGACGCCGACGACTATCA
GACGACGAATTCGAACGCGGTGGGCTCGGTGATCGCGAACGCGCTGTCGGGCGCCGCGCAATCGCTGACGGGATCGAACG
GCCTTGCGCTCTACGTGCTCGGCGTGTCGGTGCCGGTCGGCACGATACTCAATCCGGTGGTCTCCGTGCTGCTGAACCTG
CTCGGCCCCGTGTTGAGCTCGCTCGATCAGGTCGTCGTGCCGCTGTTGAACCTGCTCGGCGTGCAGCTCGGCGCGGCGAC
GGTTCACAATCTGGCGCTGACCTGCGGCACCGCGCAAACGGTCTATTGA

Upstream 100 bases:

>100_bases
GGATCGGCCGCGGGCATGAGCGGTATGAGCGGCGGGGGCGGCGGGGGCGGCGGCGCGGGCTATTCCCTCGCGCCGGCACC
GGGTTCGCAGTGAGGATCGC

Downstream 100 bases:

>100_bases
AGATTCACGCATAACGATGAGAAACACGAACGCAATCGAAGGGCTCGATCTGTACGTCTGGGAGGGCAAGGCCGATATCG
TCGACCGGGTCGCGCGCTGC

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MPLARRRAERRPPARGRGPIARERGSFAVVAAIWMLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPN
AAAAANARSNGFDPAAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVD
QFTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSR
TQVVNANLQASVAALQAIAGAHLGGGTFRLGGQPGAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATG
LQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDL
SLPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAV
ALPAVVPKASAATLTFNGVAGDADDYQTTNSNAVGSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNL
LGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALTCGTAQTVY

Sequences:

>Translated_602_residues
MPLARRRAERRPPARGRGPIARERGSFAVVAAIWMLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPN
AAAAANARSNGFDPAAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVD
QFTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSR
TQVVNANLQASVAALQAIAGAHLGGGTFRLGGQPGAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATG
LQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDL
SLPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAV
ALPAVVPKASAATLTFNGVAGDADDYQTTNSNAVGSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNL
LGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALTCGTAQTVY
>Mature_601_residues
PLARRRAERRPPARGRGPIARERGSFAVVAAIWMLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNA
AAAANARSNGFDPAAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQ
FTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRT
QVVNANLQASVAALQAIAGAHLGGGTFRLGGQPGAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGL
QLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLS
LPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVA
LPAVVPKASAATLTFNGVAGDADDYQTTNSNAVGSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLL
GPVLSSLDQVVVPLLNLLGVQLGAATVHNLALTCGTAQTVY

Specific function: Unknown

COG id: COG4655

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60703; Mature: 60572

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLARRRAERRPPARGRGPIARERGSFAVVAAIWMLVAIAALGAVDIGNVFFVRRDLQRV
CCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNAGPSYFN
HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
AAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVL
HCCCCCCEEEEEEECCCCEEEECCCCEECCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHH
NALLGTNLGLSALSYQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSR
HHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TQVVNANLQASVAALQAIAGAHLGGGTFRLGGQPGAPGVFALGLSDTQAAADAKINVFDA
HHEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHH
LMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAWRTQANN
HHHHHHHHHCCCCCHHHHHCHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEECCC
AQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSC
CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCHH
AASAAASRATLGVQPGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAV
HHHHHHHHCEECCCCCHHHHEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
ALPAVVPKASAATLTFNGVAGDADDYQTTNSNAVGSVIANALSGAAQSLTGSNGLALYVL
HCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALTCGTAQT
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
VY
CC
>Mature Secondary Structure 
PLARRRAERRPPARGRGPIARERGSFAVVAAIWMLVAIAALGAVDIGNVFFVRRDLQRV
CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNAGPSYFN
HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
AAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVL
HCCCCCCEEEEEEECCCCEEEECCCCEECCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHH
NALLGTNLGLSALSYQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSR
HHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TQVVNANLQASVAALQAIAGAHLGGGTFRLGGQPGAPGVFALGLSDTQAAADAKINVFDA
HHEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHH
LMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAWRTQANN
HHHHHHHHHCCCCCHHHHHCHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEECCC
AQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSC
CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCHH
AASAAASRATLGVQPGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAV
HHHHHHHHCEECCCCCHHHHEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
ALPAVVPKASAATLTFNGVAGDADDYQTTNSNAVGSVIANALSGAAQSLTGSNGLALYVL
HCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALTCGTAQT
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
VY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA