Click here to switch to the map view.

The map label for this gene is 237812071

Identifier: 237812071

GI number: 237812071

Start: 1764305

End: 1765327

Strand: Direct

Name: 237812071

Synonym: GBP346_A1813

Alternate gene names: NA

Gene position: 1764305-1765327 (Clockwise)

Preceding gene: 237812070

Following gene: 237812072

Centisome position: 43.05

GC content: 73.31

Gene sequence:

>1023_bases
ATGGATCCCAGCCGCCTCGGCGCAATCGCGCTCGTTCTCGGCGCAATCGGCGTGCTGATGCTCGCCGCGCTCGCGATCAT
GCAGGCCGTGCTCGCGCGGCGCACCGGCCGCACGCTCGCGGACGCGCTCGATCAGCGCGCCGCCGCGTTGGAGGCGGCCG
CCGCGCGGGTCGCGGCGGGGGCGGGGGCGGGGTCGGCCGGCGCGGCGCGCGCGGGCATGCCCGAGGCGGCGCCTGACGCG
CGCCGTCCGCGCTTCGCGGCGCTGCTCGATCGCGCGGGCCGGTTCGGAATGCGGCTGCTCGATACGCGGCTCGGCAAGCA
GATCGTCGCCGACGAAGACCGGATGCTGCTCGAACAGTGCGGCTACGTCGACGCGCACACGCGCGGCATCTTCCTGAGCG
CGCGGATCGCGTGTGCGATCGCGCTGCCCGCCGCCGTCGCGCTCGTCGGCGGCGAGACGGTCCGCACGCATCTGGGCGCG
TGGGTCGCGCTGTCGGTGATCGCCGGCTTCATGCTGCCGAAGATCTACGTGCGCCGCCGCGCGGCGGCGCGCCGCCAGTC
CGTCGTCGACGAGATGCCGCTGCTCGTCGACATGCTGCGGCTCTTGCAGGGCGTCGGGCTGTCGCTCGACCAGAGCATCC
AGGTCGTCACCAACGACTTCAGGGGGATGCTGCCCGTGCTGTCGTCGGAGCTCGGGATCGCGCAGCGGCAGTTCGTCGCG
GGGCGCACGCGCGAGCAGTCGCTGCAGCGTCTCGCGACGAGCTTCGACAACGAGGACCTGCGCGCGATCGTGCGCCTGCT
GATCCAGGTCGACAAGCACGGCGGCGCGGTGCAGGAGCCGCTCAAGCAGTTCGGCGACCGGCTGCGCGAAGTGCGCCGCG
CGATGCTGCGCGAGCGCATCGGCCGCCTCACGGTGAAAATGACGGGCGTGATGATTCTCACGCTGCTGCCCGCGCTGTTC
ATCGTGACGGCGGGGCCGGGGATGCTCGCCGTCACGCATGCGCTCACGGCCGCGCGCCGCTAG

Upstream 100 bases:

>100_bases
GGCTTGACCCGACGGGCCGCCAGCTCGTGTATCTCGCATTCATCCTGCAAATCGCCGGCGGCTACTGGCTGTACCGGCTC
GCCCGATTGAGGTGACGACG

Downstream 100 bases:

>100_bases
CCGCGCGTGCCGCCGCGCAACGAAGGAAGGAACGACATGAGACGAAACGGCTTTTCACCGATGACGACGGCGGCGCTCGC
GGCGCTTGCGCTGTCGCTCG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System; TadC Protein; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System Protein F Subunit; Type II Secretion System Protein F Domain; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Type II Secretion System Protein Transmembrane; Secretion System Protein TadC; Integral Membrane Protein; Transmembrane Type II Secretion Protein; Type II/IV Secretion System Membrane Protein; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAGAGAGSAGAARAGMPEAAPDA
RRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVDAHTRGIFLSARIACAIALPAAVALVGGETVRTHLGA
WVALSVIAGFMLPKIYVRRRAAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVA
GRTREQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLTVKMTGVMILTLLPALF
IVTAGPGMLAVTHALTAARR

Sequences:

>Translated_340_residues
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAGAGAGSAGAARAGMPEAAPDA
RRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVDAHTRGIFLSARIACAIALPAAVALVGGETVRTHLGA
WVALSVIAGFMLPKIYVRRRAAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVA
GRTREQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLTVKMTGVMILTLLPALF
IVTAGPGMLAVTHALTAARR
>Mature_340_residues
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAGAGAGSAGAARAGMPEAAPDA
RRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVDAHTRGIFLSARIACAIALPAAVALVGGETVRTHLGA
WVALSVIAGFMLPKIYVRRRAAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVA
GRTREQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLTVKMTGVMILTLLPALF
IVTAGPGMLAVTHALTAARR

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36387; Mature: 36387

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
AGAGSAGAARAGMPEAAPDARRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQC
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GYVDAHTRGIFLSARIACAIALPAAVALVGGETVRTHLGAWVALSVIAGFMLPKIYVRRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRTREQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERI
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GRLTVKMTGVMILTLLPALFIVTAGPGMLAVTHALTAARR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
AGAGSAGAARAGMPEAAPDARRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQC
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GYVDAHTRGIFLSARIACAIALPAAVALVGGETVRTHLGAWVALSVIAGFMLPKIYVRRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRTREQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERI
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GRLTVKMTGVMILTLLPALFIVTAGPGMLAVTHALTAARR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA