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The map label for this gene is 237812060

Identifier: 237812060

GI number: 237812060

Start: 1754799

End: 1756349

Strand: Reverse

Name: 237812060

Synonym: GBP346_A1802

Alternate gene names: NA

Gene position: 1756349-1754799 (Counterclockwise)

Preceding gene: 237812077

Following gene: 237812059

Centisome position: 42.85

GC content: 75.24

Gene sequence:

>1551_bases
ATGCTCTCCCTCTCCGCTTGCGGCGGCTCCGGCACGATCAGCAAGGGCCTCGACGGCTCGGGCTCGGGCTCCGGCAGCGG
CGGCGGCAATGCGATTTCCACGACGGGCGGCTCCGGCTCGGGCGGCTCGGGCGGCACGAGCGGCGCGGGCGGCTCGGGTT
CGGGCGGCAGCGGCAGCTCCGGCTCGACGGGCGGCCTGTCGGGCGGCGGCGGCTCGACCTCCGGCGGCGGCTCCACGTCG
GGCGGCGGCTCGACCTCCGGCGGCACGTCGACCTCGTCGAGCATCAACGCGCTCGGCACGATCGCCGGCAACACGGGCGG
CATCATCAGCGGCGCCGGCTCGACCGTGTCGGGTCTCGGCACCGTCGTCGGCAGCCAGACGCTGCCCGGCGTGAACCCGC
AAACGACGCAAGCGCTCGGCGGCGTCGTCCAGAGTCTCGGCGGCGCGGTCAGCGCGCTCGGCTCGGGCGTGACGAGCGGC
ATCGGCCAGCTCGGTTCGTCGACCAACCCGATCGGCACGACGGTCGCGAGCACGGGCGGCGTGGTCAGCCAACTGGGCGG
CGCCGTCACGCAGACGGGCAACCTCGTGACGAGCCTCGGCACCGGCCCGCTCGCGCCGCTCGCCCCGCTCACGTCGCCGC
TCGGCGGCGCGGTCAGCACGCTCGGCAACACGATCACGGCGGGCGGCACGACGCTCACCACCGCGCTGTCGACGGGCCCC
GTCCAGCAACTGACGCAGACGGTCAGCTCGGCGATCACGCCGATCACGTCGATGGTCACGGGCACGACGCAGACGGTCGG
CAACGTGACGGGCCTCGGCGCGCCCGTCAACACGCTGCTCGGCACGATCGGCGGCGGGCTGAACCAGGCCGGCGCGCTGA
TCTCGAAGACGGGCAACAACCCGGTCACGACGGGCCTCGGCCAAACGGTGTCGGCGACGGGCAACACGATCACGTCGGTC
GGCGGCCTGCTGACGGGCGGCAGCGGCGCGACGAACCCGCTCGCGCCGATCACGGCCGCCGTCGGCGGCCTGACGGGCAC
GCTCAGCGGCGTCAGCGGCGCAACCTCGGGCACCCCGCTCGCACCGCTCACGAACGTCGTGTCGACGGTCACCGGCGCGC
TCTCCGGCGCCACCGGCGGCGCGACGTCGACGAGCCCGCTCGCGCCCATCACGGGCCTCGTGTCGACGGTCACCGGCGCA
CTCTCCGGCGCCACCGGCGGTACGACGGGCTCGACCAGCCCGCTCGCGCCCGTCACCGGCCTCGTGTCGACCGTCACCGG
CGCGCTCTCCGGCGCCACCGGCGGCACGACGTCGACGAGCCCGCTCGCGCCCGTCACGAATCTCGTGTCGACCGCCACGG
GCGCGCTCGGCGGCGCGACCGCCGCGCCGGCGACGAGCACGACGACGAGCACGACGACGAGCGCGACGAACCCGGTCGCG
AGCCTCACCGCACCGTTGACCGGCACGAGCAGCGGCACGAGCGGCGCGACCAACCTGCTGGCGCCCGTCACGTCGCTCGT
CGGCGGCCTGCTCGGCGGCATCAAGAAGTAA

Upstream 100 bases:

>100_bases
AATCAAGAGACAACACACCAATGCGAGGACGATGATGAACATCAACACGATTTCCCATGGCACGCTCCGGACGACTTTGA
TCGCGGCCACCGTGGCAGCC

Downstream 100 bases:

>100_bases
AAGGGCCGGCGCCCACCCAGCATCAGAAAAGACAGCGAGGAGCACCATCATGACCCAGCAACGTTTCGCCCCATCGTTCG
CGCTCGCGGCCTGGCGCGTT

Product: collagen triple helix repeat protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MLSLSACGGSGTISKGLDGSGSGSGSGGGNAISTTGGSGSGGSGGTSGAGGSGSGGSGSSGSTGGLSGGGGSTSGGGSTS
GGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSG
IGQLGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGNTITAGGTTLTTALSTGP
VQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNNPVTTGLGQTVSATGNTITSV
GGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGA
LSGATGGTTGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAPATSTTTSTTTSATNPVA
SLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK

Sequences:

>Translated_516_residues
MLSLSACGGSGTISKGLDGSGSGSGSGGGNAISTTGGSGSGGSGGTSGAGGSGSGGSGSSGSTGGLSGGGGSTSGGGSTS
GGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSG
IGQLGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGNTITAGGTTLTTALSTGP
VQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNNPVTTGLGQTVSATGNTITSV
GGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGA
LSGATGGTTGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAPATSTTTSTTTSATNPVA
SLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK
>Mature_516_residues
MLSLSACGGSGTISKGLDGSGSGSGSGGGNAISTTGGSGSGGSGGTSGAGGSGSGGSGSSGSTGGLSGGGGSTSGGGSTS
GGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSG
IGQLGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGNTITAGGTTLTTALSTGP
VQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNNPVTTGLGQTVSATGNTITSV
GGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGA
LSGATGGTTGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAPATSTTTSTTTSATNPVA
SLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45720; Mature: 45720

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLSACGGSGTISKGLDGSGSGSGSGGGNAISTTGGSGSGGSGGTSGAGGSGSGGSGSS
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GSTGGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCEEECCCCHHHHHH
TVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSGIGQLGSSTNPIGTTVASTGG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
VVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGNTITAGGTTLTTALSTGP
HHHHHCCHHHHCCCCCEECCCCCCCCHHHHCCCCHHHHHHHCCCEECCCCEEEHHHCCCH
VQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNN
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCC
PVTTGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPL
CCCCCCCCEECCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCH
APLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGALSGATGGTTGSTSPLAPVTG
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAPATSTTTSTTTSATNPVA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
SLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSLSACGGSGTISKGLDGSGSGSGSGGGNAISTTGGSGSGGSGGTSGAGGSGSGGSGSS
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GSTGGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCEEECCCCHHHHHH
TVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSGIGQLGSSTNPIGTTVASTGG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
VVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGNTITAGGTTLTTALSTGP
HHHHHCCHHHHCCCCCEECCCCCCCCHHHHCCCCHHHHHHHCCCEECCCCEEEHHHCCCH
VQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNN
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCC
PVTTGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPL
CCCCCCCCEECCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCH
APLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGALSGATGGTTGSTSPLAPVTG
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAPATSTTTSTTTSATNPVA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
SLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA