Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812003

Identifier: 237812003

GI number: 237812003

Start: 1690438

End: 1691970

Strand: Reverse

Name: 237812003

Synonym: GBP346_A1743

Alternate gene names: NA

Gene position: 1691970-1690438 (Counterclockwise)

Preceding gene: 237812005

Following gene: 237812002

Centisome position: 41.28

GC content: 64.71

Gene sequence:

>1533_bases
ATGATTAATGCGAAAACGGGCTTTCTATTTTTTATTTTCGTGATGAGCCTGATCGGATGCCGCCCGGCATTCGCCCAAAC
CAATACGCCGGTCACCGGCATCGATCTGGGCGGCGAAATCATCGAGATCATCAAGCAGAATCCGCAAGATCCGACACAGG
CGATCAACAATTACATGTCCGGCGTCGCCGCGACGAACGTGCGCTGGGTGCGCATTCATCTCGACTGGTCGGCCATCCAG
CCGGCGTCGACGTGGATCTTCACGAGCGACCCCAATCCCGGCCGGAGCAGCGGCCTCACCTGGGGCGCGACGGACATCGT
CGTGCGGGCGGCCCGGAATTACGGAATACGCATTCTCGGCGTGATCACGTCGACGCCGCGCTGGGCCACCCACGCGCAAT
GTCCGAGCTACTACCGGCAATCGACCGACGACGCCTACAAGCTTTGCGCGCCGAATCTCACGTCGTACACGAACTTCGCG
CGCGCCGCCGCCAAGCATTACGGCAACGACAGCTACGGCGGAAAGATCGACGCGTGGGAAATCTGGAACGAGCCGAACTG
CGGCCCGAACTTCATTCCTCACGATCCGGTCCTTTATACGCGGCTCGTGAAGAGCGCATACCCGGCGATCAAGCAGGCCA
ATCCGTCGGCGTCCGTCTATGCGGGCGGCAGCTCGGGGTGCCTCACGTCGCCGAACAACGGCACCGGCGCGCTGCCGTCG
AGCGGCGTGGCCGGCCTCGTGAACTCGACGGACGCCCGCTACCCCGCGCCCACGCAGTGGGAGCCGCGCGACTGGCTGGC
CGTGATGTACGCGAACGGCGCGCGCGGGTATTTCGACGGACTCGCGCACCATCCCCACTGCCACAGCGACGACTGGCAAC
TGCCGGGCGACCAGTGCCCGAGCACGACCGTCAACTCCGTGTACCCGGATTACTCGAATCCGTTCAACATCATGTGGCAC
ACGTTCGCCTCGCCTTCGTACGGTTGGCCCGCTCCGACCGGCAAGACGTTCGCCAGCTATACGGGAACGAGCCTGCGCGA
GCTGATGAACGCGAACGGCGACGGGGGAAAGCCGATCGTGATCACCGAGTTCGGCGTCGCGACAACCGCGTCGGACGGCG
CGACCGACTTCACCGGCCAGTTGGGCGGCAGTGCGCAGCAATACGCAAACGCCGATTTTCAGACGATCGCGCCGGCGTAC
CTGACGCAGGCGAATCAGGAACGCGAGTACAAGGCGCTGATCGCCTGGATCGCCAATCAGCCCTACGGCCAGTACGGCCC
GGTTTACGCGTACTGCTACTCGGACATGGCGCTGTCGTCGCCGTATAGCGCGAACATCTACGAGCCGTATTTCGGCCTGA
TGACGATCACCGCGTCGACGGCCACCTCCGGCACGACGGGCGCGCCCAAGATCGCCGGCGCGTATCAGGCCGCATCGGGG
CAGTATTACCCGGCCTGGCCCAACTTCGGCGCCGCCGCAACGGCGGCGGCCAATCACACGCCGGGCTATGCGCCGGTCGG
CCCCGGCTGGTGA

Upstream 100 bases:

>100_bases
CGAAAGACACGACGACGGGCCGCCGCGCGGCCGCCCGCATCGGCCGCGCCCCGAGTCTCGAACCGACCATTCCATTCAAT
TCATCAGGCCGAGTTAATTC

Downstream 100 bases:

>100_bases
CGCATCGGGCAAGGCGAACGAGAAAACCGGCGGCCGCCCACCGGCGCGCGGGCGCATCGCGTCAGGCGCGGTAGCCGCCG
GGCGAGCGCTTTCGGCTCCG

Product: xylann 1,4-beta-xylosidase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMSGVAATNVRWVRIHLDWSAIQ
PASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILGVITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFA
RAAAKHYGNDSYGGKIDAWEIWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
SGVAGLVNSTDARYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCPSTTVNSVYPDYSNPFNIMWH
TFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIVITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAY
LTQANQEREYKALIAWIANQPYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLMTITASTATSGTTGAPKIAGAYQAASG
QYYPAWPNFGAAATAAANHTPGYAPVGPGW

Sequences:

>Translated_510_residues
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMSGVAATNVRWVRIHLDWSAIQ
PASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILGVITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFA
RAAAKHYGNDSYGGKIDAWEIWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
SGVAGLVNSTDARYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCPSTTVNSVYPDYSNPFNIMWH
TFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIVITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAY
LTQANQEREYKALIAWIANQPYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLMTITASTATSGTTGAPKIAGAYQAASG
QYYPAWPNFGAAATAAANHTPGYAPVGPGW
>Mature_510_residues
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMSGVAATNVRWVRIHLDWSAIQ
PASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILGVITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFA
RAAAKHYGNDSYGGKIDAWEIWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
SGVAGLVNSTDARYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCPSTTVNSVYPDYSNPFNIMWH
TFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIVITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAY
LTQANQEREYKALIAWIANQPYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLMTITASTATSGTTGAPKIAGAYQAASG
QYYPAWPNFGAAATAAANHTPGYAPVGPGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54796; Mature: 54796

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHH
GVAATNVRWVRIHLDWSAIQPASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILG
CHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFARAAAKHYGNDSYGGKIDAWE
EEECCCCCCCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
IWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC
SGVAGLVNSTDARYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCP
CCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCC
STTVNSVYPDYSNPFNIMWHTFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIV
CCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCEEE
ITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAYLTQANQEREYKALIAWIANQ
EEECCCEECCCCCCCCCCCCCCCCHHHHCCCCHHHHCHHHHHHCCCHHHHHHHHHHHHCC
PYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLMTITASTATSGTTGAPKIAGAYQAASG
CCCCCCCEEEEEECCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCC
QYYPAWPNFGAAATAAANHTPGYAPVGPGW
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHH
GVAATNVRWVRIHLDWSAIQPASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILG
CHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFARAAAKHYGNDSYGGKIDAWE
EEECCCCCCCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
IWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC
SGVAGLVNSTDARYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCP
CCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCC
STTVNSVYPDYSNPFNIMWHTFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIV
CCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCEEE
ITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAYLTQANQEREYKALIAWIANQ
EEECCCEECCCCCCCCCCCCCCCCHHHHCCCCHHHHCHHHHHHCCCHHHHHHHHHHHHCC
PYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLMTITASTATSGTTGAPKIAGAYQAASG
CCCCCCCEEEEEECCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCC
QYYPAWPNFGAAATAAANHTPGYAPVGPGW
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA