| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237811952
Identifier: 237811952
GI number: 237811952
Start: 1632678
End: 1633031
Strand: Direct
Name: 237811952
Synonym: GBP346_A1692
Alternate gene names: NA
Gene position: 1632678-1633031 (Clockwise)
Preceding gene: 237811951
Following gene: 237811953
Centisome position: 39.84
GC content: 72.32
Gene sequence:
>354_bases GTGACGGCGGCGCGCATTTCGTCGCGCATGCTCGCGCCGATGCCCGCGCGGCCGTTGCCGCGCGCGTTTTCGCGGGCGTC CGCCCGCGCGATGACGCCGCGCGCGGCGTCGCCGCGTGGCGAACGCGCCGCTATCGCCGTCATTGCCGCTTGCGCCCCTT CCGCCGCTTGCGCCGCTTGCGCCGCTTGCGCCGCGCAACCGACCGGCCGCTCTCGACGCCTCACTCAGCCACCGTTTTCT CGCCTCGCGCCGACATGTCCTCGACCAAACCCGTTCCGCTGCCGCGCAGCGCCTATCGCCACTTCCTGCCGATCACGACG CGCTGGATGGACAACGATGTCTACGGCCACGTGA
Upstream 100 bases:
>100_bases TCGACCACGTGATCGAGGGCGCGCTCGCCGATCATTGCCACAAGACGAACCCGCGTATCGCGTCGGCCGACGATTACCGG CGCATGCTCGTCGAATCGCT
Downstream 100 bases:
>100_bases ACAACGTCGTCTACTACAGCTACTTCGACACGGTCGTCAACGAGTACCTGATCCGCCGCGGCGCGCTCGACGTCGAGCGC GGCGCGACGATCGGCCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTAARISSRMLAPMPARPLPRAFSRASARAMTPRAASPRGERAAIAVIAACAPSAACAACAACAAQPTGRSRRLTQPPFS RLAPTCPRPNPFRCRAAPIATSCRSRRAGWTTMSTAT
Sequences:
>Translated_117_residues MTAARISSRMLAPMPARPLPRAFSRASARAMTPRAASPRGERAAIAVIAACAPSAACAACAACAAQPTGRSRRLTQPPFS RLAPTCPRPNPFRCRAAPIATSCRSRRAGWTTMSTAT >Mature_116_residues TAARISSRMLAPMPARPLPRAFSRASARAMTPRAASPRGERAAIAVIAACAPSAACAACAACAAQPTGRSRRLTQPPFSR LAPTCPRPNPFRCRAAPIATSCRSRRAGWTTMSTAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12224; Mature: 12093
Theoretical pI: Translated: 12.55; Mature: 12.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARISSRMLAPMPARPLPRAFSRASARAMTPRAASPRGERAAIAVIAACAPSAACAAC CCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH AACAAQPTGRSRRLTQPPFSRLAPTCPRPNPFRCRAAPIATSCRSRRAGWTTMSTAT HHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TAARISSRMLAPMPARPLPRAFSRASARAMTPRAASPRGERAAIAVIAACAPSAACAAC CCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH AACAAQPTGRSRRLTQPPFSRLAPTCPRPNPFRCRAAPIATSCRSRRAGWTTMSTAT HHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA