| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is nudC [C]
Identifier: 237811949
GI number: 237811949
Start: 1630252
End: 1630881
Strand: Direct
Name: nudC [C]
Synonym: GBP346_A1689
Alternate gene names: 237811949
Gene position: 1630252-1630881 (Clockwise)
Preceding gene: 237811947
Following gene: 237811951
Centisome position: 39.78
GC content: 70.16
Gene sequence:
>630_bases ATGCGGGATCACGATCCTCCGAACGGACGGCCGGCGGTTGCCGGCGCGTTCGGCGGCAGCCCGCATTCGCCCTCGACCAT GACCACCGCCGACTACCGCTTCTGTCCTCGCTGCGCGCGAGCGCTCGCCGAGCGCGCCGATCCCGTCGACGAGGGCGGCC GCCTGCGCCGCGCGTGCCCCGACGCAACCTGCGGCTATGTCCACTGGAACAACCCGGTGCCCGTCGTCGCGGCGATCGTC GAGTACGAAGGCCGGATCCTGCTCGCGCGCAACGCCGCGTGGCCGGAAGGCATGTTCGCGCTCATCACCGGCTTTCTCGA GCACGGCGAGACGCCCGAGGCGGGCATCGCGCGCGAAGTGCGCGAGGAAACGTCGCTCGAGGCCGAATCCGTGACGCTCG TCGGCGTCTACGAGTTCATCCGCAAGAACGAGCTGATCATCGCGTATCACGTGCGCGCGAGCGGGACGATCCGCCTGTCG CCCGAATTGCTCGAATATCGGCTCATCGAGGCGCCGAAGCTGCGGCCGTGGCGCGCGGGCACCGGCCAGGCGGTCGCCGA CTGGATGCGCGCGCGCGGGCTCGAATTCGAGTTCGTCGATTTTCCCGGAGCGGTCGCGAACCCGGGCTGA
Upstream 100 bases:
>100_bases CGGCGCGGCGCGATCGCTCGACGGTCGGCGCCGGCGGGCCGGCGTTGCCCCCCGATGCCGGATCGACGTCCGCTGCGTCC CGCCGCCCAAACTCGCTAAA
Downstream 100 bases:
>100_bases CGAACGATAGCGGGCGGCGGCAAGGGACGGCGAACGGCGCGCGGTTCGCGCCGGCATCGCGGGCCGCGCCGGCGCGGCGT GCCGCCCTCGACGCGCGCGT
Product: pyrophosphatase, MutT/nudix family
Products: AMP; NMNH. [C]
Alternate protein names: ADP-Ribose Pyrophosphatase; Nudix Hydrolase; Phosphatase; NADH Pyrophosphatase; Peroxisomal NADH Pyrophosphatase Nudt; NAD(+) Diphosphatase; Hydrolase NUDIX Domain; Hydrolase Nudix Family; NUDIX/MutT Family Protein; MutT-Like Protein; Phosphohydrolase; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; MutT/Nudix Family Protein; NADH Pyrophosphatase-Like Rudimentary NUDIX Domain Family; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MRDHDPPNGRPAVAGAFGGSPHSPSTMTTADYRFCPRCARALAERADPVDEGGRLRRACPDATCGYVHWNNPVPVVAAIV EYEGRILLARNAAWPEGMFALITGFLEHGETPEAGIAREVREETSLEAESVTLVGVYEFIRKNELIIAYHVRASGTIRLS PELLEYRLIEAPKLRPWRAGTGQAVADWMRARGLEFEFVDFPGAVANPG
Sequences:
>Translated_209_residues MRDHDPPNGRPAVAGAFGGSPHSPSTMTTADYRFCPRCARALAERADPVDEGGRLRRACPDATCGYVHWNNPVPVVAAIV EYEGRILLARNAAWPEGMFALITGFLEHGETPEAGIAREVREETSLEAESVTLVGVYEFIRKNELIIAYHVRASGTIRLS PELLEYRLIEAPKLRPWRAGTGQAVADWMRARGLEFEFVDFPGAVANPG >Mature_209_residues MRDHDPPNGRPAVAGAFGGSPHSPSTMTTADYRFCPRCARALAERADPVDEGGRLRRACPDATCGYVHWNNPVPVVAAIV EYEGRILLARNAAWPEGMFALITGFLEHGETPEAGIAREVREETSLEAESVTLVGVYEFIRKNELIIAYHVRASGTIRLS PELLEYRLIEAPKLRPWRAGTGQAVADWMRARGLEFEFVDFPGAVANPG
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 22943; Mature: 22943
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDHDPPNGRPAVAGAFGGSPHSPSTMTTADYRFCPRCARALAERADPVDEGGRLRRACP CCCCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHCCC DATCGYVHWNNPVPVVAAIVEYEGRILLARNAAWPEGMFALITGFLEHGETPEAGIAREV CCCEEEEEECCCCCHHHHEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHH REETSLEAESVTLVGVYEFIRKNELIIAYHVRASGTIRLSPELLEYRLIEAPKLRPWRAG HHHHCCCHHHEEEHHHHHHHHCCCEEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCCC TGQAVADWMRARGLEFEFVDFPGAVANPG CCHHHHHHHHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure MRDHDPPNGRPAVAGAFGGSPHSPSTMTTADYRFCPRCARALAERADPVDEGGRLRRACP CCCCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHCCC DATCGYVHWNNPVPVVAAIVEYEGRILLARNAAWPEGMFALITGFLEHGETPEAGIAREV CCCEEEEEECCCCCHHHHEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHH REETSLEAESVTLVGVYEFIRKNELIIAYHVRASGTIRLSPELLEYRLIEAPKLRPWRAG HHHHCCCHHHEEEHHHHHHHHCCCEEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCCC TGQAVADWMRARGLEFEFVDFPGAVANPG CCHHHHHHHHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H2O [C]
Specific reaction: NADH + H2O = AMP + NMNH. [C]
General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA