| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811905
Identifier: 237811905
GI number: 237811905
Start: 1583776
End: 1584696
Strand: Direct
Name: 237811905
Synonym: GBP346_A1645
Alternate gene names: NA
Gene position: 1583776-1584696 (Clockwise)
Preceding gene: 237811903
Following gene: 237811906
Centisome position: 38.64
GC content: 53.85
Gene sequence:
>921_bases TTGGGCTTGGTGAGAATTAGTTCCGATTTTATTGAGTGGATTGATCGTCGATTTTTGTATCGAGGTATGTTGAATGTTTC GCTTGTATTTTTGTGTGTAATTTCGTTTTTTATTTTTGGGGGATGGCTTGCCGTCCGAGGGAGTGTTTCGGACGGTGATG AAAGAATGTTTTTTATGTTTTCGGTGCTAGCGCCAGTGGCGATGATTGCACTGTTGTATTATAAAATATTAAGCAAGGAG TTTTTTGCTTGCGTTTATTATCCAATTCGATTTAATCGTAGAACGCGCAATATCCACATATTCCGCGATAAAGGCGACGG CGGCATCCTGACCGTGCCCTGGGACTCGGTCTTTTTCCACATCGGACGCGGCACCGACATGAAGTTCCTTCGAGACATCC GCGGCGAGGTGATGGAGGGCGACATCGTCAAGGATACGTTCGCACTGGGTCACTGCGCGGAAAGCGACCGCCCGGTGCTG GAAATGTGGGAATTCATCCGTCGCTACATGGAAGAGGGGCCGCAAGCCGTGGCAGAAGTGCCGCTGGACAAGTATGTGGA ACTATCCGTCGCACCGACGCTGAAGAACTGCCTGATCTCCGCCGTCGGCTTCACGAATGCGACGACACCGACGAAGCGTA TCCTGCTGTCCCCGTTCATCGGTTTGTTCACGCTGGTGCGATGGCTCGTCTTCAAAACCTGCAAGGAGCCGCAATTCCCG CCGGAGATCGAAGCCGAATGCCGAGTGGAGCCGAACGATCCGAACGTCTGGCCGATTCCGGCGTCGATCGGTGAGTTTGC TGCGACGGTTCCGGGCTTCATCGAACGCGCGAGGGAAAAAGCGCAGCGCGGCCAAGCGCAGGACAATGCGGATCGGCAGC CTCAACCCATGCGCAAGCGTCGCCGTCGACGTGCGCAATAG
Upstream 100 bases:
>100_bases ATGGATGGCACCTTTCCCTATAAATCGAAAATTGGAGGCATGGGAAAAAGAGGGTGGGTTGCCTCGGATTCGCCAGAATG GTATTGGGCCGAATCAAAGG
Downstream 100 bases:
>100_bases TCGTTCCGGTTATTCGAAGCGCAGCCACGTTCGAAGCCGCCGCTCTGTGCGGACGCTGTCCCATGCGGGAGTGCATGCCG GTGCGCCGGTTCCAGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGLVRISSDFIEWIDRRFLYRGMLNVSLVFLCVISFFIFGGWLAVRGSVSDGDERMFFMFSVLAPVAMIALLYYKILSKE FFACVYYPIRFNRRTRNIHIFRDKGDGGILTVPWDSVFFHIGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVL EMWEFIRRYMEEGPQAVAEVPLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFP PEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQDNADRQPQPMRKRRRRRAQ
Sequences:
>Translated_306_residues MGLVRISSDFIEWIDRRFLYRGMLNVSLVFLCVISFFIFGGWLAVRGSVSDGDERMFFMFSVLAPVAMIALLYYKILSKE FFACVYYPIRFNRRTRNIHIFRDKGDGGILTVPWDSVFFHIGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVL EMWEFIRRYMEEGPQAVAEVPLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFP PEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQDNADRQPQPMRKRRRRRAQ >Mature_305_residues GLVRISSDFIEWIDRRFLYRGMLNVSLVFLCVISFFIFGGWLAVRGSVSDGDERMFFMFSVLAPVAMIALLYYKILSKEF FACVYYPIRFNRRTRNIHIFRDKGDGGILTVPWDSVFFHIGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLE MWEFIRRYMEEGPQAVAEVPLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFPP EIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQDNADRQPQPMRKRRRRRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35268; Mature: 35136
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVRISSDFIEWIDRRFLYRGMLNVSLVFLCVISFFIFGGWLAVRGSVSDGDERMFFMF CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH SVLAPVAMIALLYYKILSKEFFACVYYPIRFNRRTRNIHIFRDKGDGGILTVPWDSVFFH HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCEEEECHHHEEEE IGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIRRYMEEGPQAVAEV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHC PLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFP CHHHHEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQDNADRQPQPMRKR CCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH RRRRAQ HHHCCC >Mature Secondary Structure GLVRISSDFIEWIDRRFLYRGMLNVSLVFLCVISFFIFGGWLAVRGSVSDGDERMFFMF CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH SVLAPVAMIALLYYKILSKEFFACVYYPIRFNRRTRNIHIFRDKGDGGILTVPWDSVFFH HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCEEEECHHHEEEE IGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIRRYMEEGPQAVAEV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHC PLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFP CHHHHEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQDNADRQPQPMRKR CCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH RRRRAQ HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA