Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237811902

Identifier: 237811902

GI number: 237811902

Start: 1581699

End: 1582271

Strand: Direct

Name: 237811902

Synonym: GBP346_A1642

Alternate gene names: NA

Gene position: 1581699-1582271 (Clockwise)

Preceding gene: 237811901

Following gene: 237811903

Centisome position: 38.59

GC content: 62.13

Gene sequence:

>573_bases
ATGCCACGCAAACGCAAGGAAGAAGTGACGATTGAACCGAGCAAGGGCTTGAACCTGGACCCGGAACTGATCAAGCAACT
GGCGCCCGGGACGCCGGAGCGGGCGATGCTCGACGAGCAACTGGCCGCACTCAAGAAGGCAATTTTCGAGCGCGCACCGG
GCGGTGAGTTGACTCACCACTTGGGCGACGAGAAGGGCGATGCCAAGCCGGCTGGCAGCACGAATCACCGCAACGGCACG
AGCCGCAAGCGCGTGGCGACTGACGATGACCTGCTCGACGTCGAGATTGCGCGCGACCGCGAAGGCACCTTCGATCCGGT
ATTGATTGCCAGGGGCGAGCGGCGCTTCACCGGCTTCGACGACAAGATCATCGCGATGTACGCGCGCGGCATGAGCGTGC
GGGAGATTCAGGGTTTCTGCTGGAGAGGTATTCTCAAACGACTCGCCACATCCGGATCGACACGGCGATGCCGGGCGCGT
TCGTGGTCGAACGTTTCCATGGGCGCGAGGGCGTCAACGAATCGTTTCGCTTCGAGATCGACGTGCTGTCGAGCGAGCCG
TTTCTCGATCTGA

Upstream 100 bases:

>100_bases
TATTGATCGGGCGCTAATGTTTTGCGGACGCCTCAAGAACTTCAGAGCCTATCCGAACTTTTGTGTGTGAGGCATAAACT
GATGGCCAAGGAGCCATTTT

Downstream 100 bases:

>100_bases
CGCCGCTCATCGGCCACGCGGCGCGGCTGCGTCTCGCGACGGGCGCGGGCGAGCGCAGCTGGAACGGCTATGTGACGCAT
GCGGCGTATGCGGACAGCGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPRKRKEEVTIEPSKGLNLDPELIKQLAPGTPERAMLDEQLAALKKAIFERAPGGELTHHLGDEKGDAKPAGSTNHRNGT
SRKRVATDDDLLDVEIARDREGTFDPVLIARGERRFTGFDDKIIAMYARGMSVREIQGFCWRGILKRLATSGSTRRCRAR
SWSNVSMGARASTNRFASRSTCCRASRFSI

Sequences:

>Translated_190_residues
MPRKRKEEVTIEPSKGLNLDPELIKQLAPGTPERAMLDEQLAALKKAIFERAPGGELTHHLGDEKGDAKPAGSTNHRNGT
SRKRVATDDDLLDVEIARDREGTFDPVLIARGERRFTGFDDKIIAMYARGMSVREIQGFCWRGILKRLATSGSTRRCRAR
SWSNVSMGARASTNRFASRSTCCRASRFSI
>Mature_189_residues
PRKRKEEVTIEPSKGLNLDPELIKQLAPGTPERAMLDEQLAALKKAIFERAPGGELTHHLGDEKGDAKPAGSTNHRNGTS
RKRVATDDDLLDVEIARDREGTFDPVLIARGERRFTGFDDKIIAMYARGMSVREIQGFCWRGILKRLATSGSTRRCRARS
WSNVSMGARASTNRFASRSTCCRASRFSI

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 21176; Mature: 21045

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKRKEEVTIEPSKGLNLDPELIKQLAPGTPERAMLDEQLAALKKAIFERAPGGELTHH
CCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LGDEKGDAKPAGSTNHRNGTSRKRVATDDDLLDVEIARDREGTFDPVLIARGERRFTGFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCC
DKIIAMYARGMSVREIQGFCWRGILKRLATSGSTRRCRARSWSNVSMGARASTNRFASRS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
TCCRASRFSI
HHHHHHCCCC
>Mature Secondary Structure 
PRKRKEEVTIEPSKGLNLDPELIKQLAPGTPERAMLDEQLAALKKAIFERAPGGELTHH
CCCCCCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LGDEKGDAKPAGSTNHRNGTSRKRVATDDDLLDVEIARDREGTFDPVLIARGERRFTGFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCC
DKIIAMYARGMSVREIQGFCWRGILKRLATSGSTRRCRARSWSNVSMGARASTNRFASRS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
TCCRASRFSI
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]