| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811887
Identifier: 237811887
GI number: 237811887
Start: 1569121
End: 1569546
Strand: Direct
Name: 237811887
Synonym: GBP346_A1627
Alternate gene names: NA
Gene position: 1569121-1569546 (Clockwise)
Preceding gene: 237811886
Following gene: 237811888
Centisome position: 38.28
GC content: 61.5
Gene sequence:
>426_bases ATGTCGCGCGGCCCGGTGCGCGTGGACATCAAGCGGATCGATGGTCAACCGGCCGCCCGTATTCCGGAGAGCGACGATAC GGGCAACGAGTGGGTACGTCTTCATATCGCCGGTGTCGGCAGAGCGACGGGGCCCGCTAGTCCGGCCGTCGTTTATTGGG TTATCACCGTGCCGGACGATGTGCCACCCGTTTATCTGAAGCGCGGCGAATGCGTCGTTTTCGGACAAAGGATCCCCGGG GCGACGGTGGAGACGCCGCCGAAGCCGTTCGATGTCGACAAACGGTACAACTTTGCGCTCGTTACGAGCAGTGAGAGTGG AACCTGGATATACAAGGGCAATTTTTGCGTGCGCGAGAAGCTCGGCGGTGGGACGCGCGCGGTGTTACTCAACGAAGATA GCGATCCTTGCCCGCGGGGACGATGA
Upstream 100 bases:
>100_bases GAAGTCAACGCTTGGTAAGCGCGGCTGTAGTTCGTGCGGAGCGATTCTTCATGGCGTGATCGCAGTCGGTGTGTCGTGCG CGATGTCTTCGGCCGTGGCA
Downstream 100 bases:
>100_bases ATCGCTTGAATGACGGGGCGCTAATTATCGTGAGTTTCGCTTCGGCGCTATCGAATTGCTGCCAAGTTTGCCAGCACTCG GCGCGAAGTACGACGTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPG ATVETPPKPFDVDKRYNFALVTSSESGTWIYKGNFCVREKLGGGTRAVLLNEDSDPCPRGR
Sequences:
>Translated_141_residues MSRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPG ATVETPPKPFDVDKRYNFALVTSSESGTWIYKGNFCVREKLGGGTRAVLLNEDSDPCPRGR >Mature_140_residues SRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDDVPPVYLKRGECVVFGQRIPGA TVETPPKPFDVDKRYNFALVTSSESGTWIYKGNFCVREKLGGGTRAVLLNEDSDPCPRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15393; Mature: 15261
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDD CCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCC VPPVYLKRGECVVFGQRIPGATVETPPKPFDVDKRYNFALVTSSESGTWIYKGNFCVREK CCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEC LGGGTRAVLLNEDSDPCPRGR CCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SRGPVRVDIKRIDGQPAARIPESDDTGNEWVRLHIAGVGRATGPASPAVVYWVITVPDD CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCC VPPVYLKRGECVVFGQRIPGATVETPPKPFDVDKRYNFALVTSSESGTWIYKGNFCVREK CCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEC LGGGTRAVLLNEDSDPCPRGR CCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA