| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811874
Identifier: 237811874
GI number: 237811874
Start: 1551227
End: 1552063
Strand: Direct
Name: 237811874
Synonym: GBP346_A1614
Alternate gene names: NA
Gene position: 1551227-1552063 (Clockwise)
Preceding gene: 237811868
Following gene: 237811876
Centisome position: 37.85
GC content: 70.61
Gene sequence:
>837_bases ATGACGATGGAACGACTGTATCGCGGCATGGATCGCGCGACGCTCGACCGCGCGTACGACAACACGCGGGCCGTAGCGGA TTTTCCGGCGGTGTTGGCCGATTTTCGCCGGCGCAGCGCGCAACTGTACGCGCGCGTTGGCGGCCGGCGCGAGGTGCGAT ACGGCGAGCGGCCGCGCGAGCGTTTCGACTGGCTTTCCTGCGGCCGCGCCGGTGCGCCGCGCTTCGTCTTCATTCACGGC GGTTACTGGCAAAACTGCGCGAAGGAGGATTTCGCGTTCGTGGCCGACGGCCCGCTCGCCGCGGGATTCGACGTCGTGCT CGCCGAATACACGCTCGCGCCCGAGGCGTCGATGACGCAGATCGTCGGCGAGATCGCCCGCCTGCTCGATCGGCTGAGCG CCGATCGCGACGGGCTCGGCGGCGCGGGGCGGCCGCTGTGCCTGAGCGGGCACTCCGCGGGCGGGCATCTGAGCGCCGTG CATCGCGGCCATGCGTGCGTGACGAGCACGCTTGCGATCAGCCCGCTCGTCGATCTCGAACCGATCAGCCTGTCGTGGCT CAACGACAAATTGCGGCTGAGCGAGCGCGAGATCGCCGATTACAGCCCGTTGTTCCATGTCGGCAAGGGCGCGCCGACGA TCGTCGCGGTCGGTGCGCACGAGCTGCCGGAGCTCGTGCGCCACGCGGACGACTACGCGCACGCATGCGCGGCGGCGGGC GAGCCGGTGCGGCGCGTGCACGTGCCGGGGCGCACGCATTTCTCCGTGCTGGAGGAACTGGCGCAGCCGGACGGCGCGCT GACGCGCCTGCTCGGGGCGTTCGTCGGCGGCGCTTGA
Upstream 100 bases:
>100_bases ATAGCGCGGTGCCGAACCGGCGCATTTTTCGGATAGACGAGCGCGGCGGCGCGCATCGACAATCGAACCGAGGCGTTTTC CCTATCCCACTCACGGGGCA
Downstream 100 bases:
>100_bases CGCGGCGGTGAAGCGCGATCGCGCTTCGTGCGCCGGCGCGCGAGGCGCGGCGCCACGCGCCGCGGCCGGCGCGCGCGGGG CTGATCGGGCAACGGTAAAA
Product: esterase
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Lipase; Kynurenine Formamidase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Domain-Containing Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTMERLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHG GYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAV HRGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA
Sequences:
>Translated_278_residues MTMERLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHG GYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAV HRGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA >Mature_277_residues TMERLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHGG YWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVH RGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAGE PVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=213, Percent_Identity=27.6995305164319, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI224465228, Length=223, Percent_Identity=27.8026905829596, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI19920830, Length=290, Percent_Identity=27.2413793103448, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30185; Mature: 30053
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMERLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRE CCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH RFDWLSCGRAGAPRFVFIHGGYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQ HHHHHHCCCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH IVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVHRGHACVTSTLAISPLVDLE HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC PISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG CCCHHHCCHHHHCCHHHHHHCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA CCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TMERLYRGMDRATLDRAYDNTRAVADFPAVLADFRRRSAQLYARVGGRREVRYGERPRE CHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH RFDWLSCGRAGAPRFVFIHGGYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQ HHHHHHCCCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH IVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVHRGHACVTSTLAISPLVDLE HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC PISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG CCCHHHCCHHHHCCHHHHHHCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA CCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA