Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is ycgJ [H]

Identifier: 237811860

GI number: 237811860

Start: 1538080

End: 1538430

Strand: Direct

Name: ycgJ [H]

Synonym: GBP346_A1600

Alternate gene names: 237811860

Gene position: 1538080-1538430 (Clockwise)

Preceding gene: 237811859

Following gene: 237811862

Centisome position: 37.53

GC content: 65.81

Gene sequence:

>351_bases
ATGGCGGCGCTGCCATTGATTGCGATTGCGGCGAGCGCGCACGCGCAGCCGCGTCATCCTGCCGTTTATTCGCCCGCCGC
CGGCGTGCTGTGCGATCGGTACGTCTGCGCGGATGTCCAGGGCATCTCGCGCGCGCTGACCGAGCGATATCTCGGCAAGC
GCGTGGCCGCGAAGGCGTTTTCACAAGGCGATTTCGATCCGACCGAATTCACGTTCGCCAACGGCGTGTTCTGTGACGTG
AAAGAGCGGCTCTGTCGCGACGATCGCTATTACGGCGCGGACGGCAAGCGCAGCGGCGCGGTGTCCCGGCGGTATACCGA
ATTGCTGTTCGGCCGCCGATCCGGCGGCTGA

Upstream 100 bases:

>100_bases
CTCGGCGGCACGGGCTTGCTGATCGGCGCGGCGCAGGCGGTCGTTCGCCGGTCCGCGCGCCGCCGATAGGGCACGGCCGA
TGAAGTCGAGCGTTTTGTTC

Downstream 100 bases:

>100_bases
TCAGGCTCACGAGCGGCCTGGCCCGCTCGTGGCGAAATTCCCATTCTTCGCTTACATCTCGACGCGATTCGCCGATGCGG
TTCGGTGAGCGTCCGCTCCG

Product: fels-1 prophage domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAFSQGDFDPTEFTFANGVFCDV
KERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG

Sequences:

>Translated_116_residues
MAALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAFSQGDFDPTEFTFANGVFCDV
KERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG
>Mature_115_residues
AALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAFSQGDFDPTEFTFANGVFCDVK
ERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787425, Length=90, Percent_Identity=57.7777777777778, Blast_Score=119, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008617 [H]

Pfam domain/function: PF05666 Fels1 [H]

EC number: NA

Molecular weight: Translated: 12621; Mature: 12490

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAF
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGDFDPTEFTFANGVFCDVKERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG
CCCCCCCCCEEECCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAF
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGDFDPTEFTFANGVFCDVKERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG
CCCCCCCCCEEECCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]