Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237811830

Identifier: 237811830

GI number: 237811830

Start: 1505123

End: 1505545

Strand: Reverse

Name: 237811830

Synonym: GBP346_A1570

Alternate gene names: NA

Gene position: 1505545-1505123 (Counterclockwise)

Preceding gene: 237811833

Following gene: 237811829

Centisome position: 36.73

GC content: 70.21

Gene sequence:

>423_bases
GTGGTCAAGCGCGCGATCATCTGCGTCGGCGACACGACGACACACGGCGGCAAGGTGCTCGAAGGCGCGCCGACGTTCAC
GCTCAACGGACGCAATGTGGCCGGTGTCGGCCACAAGGTACTTTGCCCTCGCTGCAAGGGCATTTTCCCCATCCTCCCCG
ATCTGCTCGGCCGCCGCTACCCGCACACGATCGGCGAGCGTGACACCGCCGTCGAGGGCATGCGCACGGCCTGCGGCGCG
GAGTTGATCGCATCGCAGGGAACCGGAACGATCGACGACGTCGGCGCGGGCGAACGCGGGGACGGCGGCTCGCCCGGCGG
ATCGGCAGCCGCAGCGGCGGCCGTCGCCCCTTCCCCCACGCTCTGCCTCGAATGCCTGAAGGCGGCGGCCAAGAACGCCG
CGACGATGGTCGCACGCGGATGA

Upstream 100 bases:

>100_bases
CCGTCAAACCTGACAGGTGTCGCGACAGCACAACCGTAACAGTCGCCCGCCGGGCGCGCTCGATGGTAAATTTGCACGCA
AATTTCCATGAGAGGGGCCA

Downstream 100 bases:

>100_bases
TGACGCCGCCGAATATCGAAGCGCGTTTCGAGATGCGCCGCCAGCAGATCACGCTGCCCGCGCGGCTCTTCGCGATGGTC
GACGCGCTGCTCTTCGCCGA

Product: PAAR motif protein

Products: NA

Alternate protein names: PAAR Motif Family; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; PAAR Motif-Containing Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHKVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA
ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPTLCLECLKAAAKNAATMVARG

Sequences:

>Translated_140_residues
MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHKVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA
ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPTLCLECLKAAAKNAATMVARG
>Mature_140_residues
MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHKVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA
ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPTLCLECLKAAAKNAATMVARG

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14011; Mature: 14011

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHKVLCPRCKGIFPILPDLLGRRY
CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCEEECCCCCCCCHHHHHHHCCCC
PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
LCLECLKAAAKNAATMVARG
HHHHHHHHHHCCHHHEEECC
>Mature Secondary Structure
MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHKVLCPRCKGIFPILPDLLGRRY
CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCEEECCCCCCCCHHHHHHHCCCC
PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAVAPSPT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
LCLECLKAAAKNAATMVARG
HHHHHHHHHHCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA