| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811827
Identifier: 237811827
GI number: 237811827
Start: 1503676
End: 1504197
Strand: Reverse
Name: 237811827
Synonym: GBP346_A1567
Alternate gene names: NA
Gene position: 1504197-1503676 (Counterclockwise)
Preceding gene: 237811828
Following gene: 237811826
Centisome position: 36.7
GC content: 58.81
Gene sequence:
>522_bases TTGGGCGGCGCGACGGTGGCGGGAACGGCGAGTCTGTCGGGTGACACGCCGAAGGAGGACAGCAAGGCGACGCCGGATGT GCGGGCGTTGCCGCGCACGGGCGAAAGCTGCAAGAAATGCCCGCCCGAGAGTGGAGCAAAGATTCGCCGCAATCATGGCG TCAACTGGAATGCGTACCGATATCAGGCACGCATTACTGGCTTTGCGTTCGACACTGAGGAATGCCGCTGGAGCGACGAG TGGAATTGGCTCGGCATTGACTTCGACGGCTTCCAGCCCGGCGAATGCTTGCTACAGGAAACCAAGGGCAACTACGATCA GTTCCTCGATGGTTCTATCCCGAAGGCCGACAAATTTTTCAAAGGATTCGACTCGATGGAAGCCACTGCCATACGACAGA GCGCGGCCGTGCGGGCCAATCCGCCAGCACGACTGATGTGGTACTTCCAAACGCCACTCGCGCGACAACGCATGCTTACT GTATTGAGACGGTTGGGCATTACCTCGACTCTTCAACCCTGA
Upstream 100 bases:
>100_bases CCGGACGGAGGGCTGGAACATGGCGGGATTGGTATTTCCGGTAATAGAAGCGGCGGCGGTGGAGCTTGGGCCGATCTTGG CGCGCGTTGGCGTCGCCTTG
Downstream 100 bases:
>100_bases GATCCTCGATGAACATCACCGCCAGTTTCCGCGATGCTTCACTCGTCGCATTCGATTTTCCCGAGATCTTGACGCGGATA TCGAAAATCATCGACGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYRYQARITGFAFDTEECRWSDE WNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFFKGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLT VLRRLGITSTLQP
Sequences:
>Translated_173_residues MGGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYRYQARITGFAFDTEECRWSDE WNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFFKGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLT VLRRLGITSTLQP >Mature_172_residues GGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYRYQARITGFAFDTEECRWSDEW NWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFFKGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLTV LRRLGITSTLQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19329; Mature: 19198
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYR CCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCHHHHCCCCCCCEEE YQARITGFAFDTEECRWSDEWNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFF EEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHH KGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLTVLRRLGITSTLQP HCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYR CCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCHHHHCCCCCCCEEE YQARITGFAFDTEECRWSDEWNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFF EEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHH KGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLTVLRRLGITSTLQP HCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA