| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811818
Identifier: 237811818
GI number: 237811818
Start: 1495180
End: 1495929
Strand: Direct
Name: 237811818
Synonym: GBP346_A1558
Alternate gene names: NA
Gene position: 1495180-1495929 (Clockwise)
Preceding gene: 237811817
Following gene: 237811820
Centisome position: 36.48
GC content: 44.8
Gene sequence:
>750_bases ATGGTTGTTGTAAAGTGGTTGATTTTAAATGTTTCGGATGATTTGTCGAAATATATTCCGGCGTTCCCGTCTGGTAGTGG TGCAAATTTCGGCACGGCGAATCTTGTAATTTGGCTTCTATTTGGATCGTTGTACTGTTATTTGTCTTCTTATCCGATTT TAGTATTTCATGCGACGCGAGTGTTGGATTTTAAAGATGTCTCCGGTAGGGTGGGTAAGGTTGGATTGAATCCCTATATT GCAACGTTGGTGATGGCAGTGGTTGTGTATGTTGCGGTGTGGTGGGATAGTCTTTTGTTGGTGTATTGTGCGGTCGCGGC ATTTTCTGTGTTGCAGATGGTGAGGCTATATCTCGTGTACTCCGATATTCGGCAATTTGGGTTTAAGGTCGGGTATGATG CAAGTGTTGCGTATGCGTATCTCAATAAATTATCAAAAACGCGTGGTGTGATAAGTGAGTCGCAAGAGCTTGCTGAGACG GACGATAGTGCCGCAGTTTCAAAAGTCAATAACTCTAAGCGCGATTTGGCGGATTCCTATAAGCATCTGCGGGAGCATGG TAATACGGCATTCATATTTTTTCTTGAATTGGTAATGTGCCCGGTGTTTGCGGTGGCGCTGCATCATGAAAAAGGGATGC TGCAGTTCTCTCATTTGTCTGTCTTGTTGTTGATGTGGGTTTTCCCCTCGATGCTCACTCATTTCTTGGGCCAGCACCTG GAGCGGAGATATTCACTGTTCCGGCATTAA
Upstream 100 bases:
>100_bases TCCAAAAATCACTTGCGGGGGAAGTATGGCTGGGGAGAGTTCGGGGTATCGTTGGTGGGAAAACTACTTAGTTAGATATT TCCTTCCGTCGATTGCTGGA
Downstream 100 bases:
>100_bases GGTGCGCGATCACCGGGGGCTCCCGGTGATCGCAAGTCGAAGGGGTTATGATACTTGCCGAACAAAGAAATCATAGCGAT CTTGGATGTGCGTTTCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MVVVKWLILNVSDDLSKYIPAFPSGSGANFGTANLVIWLLFGSLYCYLSSYPILVFHATRVLDFKDVSGRVGKVGLNPYI ATLVMAVVVYVAVWWDSLLLVYCAVAAFSVLQMVRLYLVYSDIRQFGFKVGYDASVAYAYLNKLSKTRGVISESQELAET DDSAAVSKVNNSKRDLADSYKHLREHGNTAFIFFLELVMCPVFAVALHHEKGMLQFSHLSVLLLMWVFPSMLTHFLGQHL ERRYSLFRH
Sequences:
>Translated_249_residues MVVVKWLILNVSDDLSKYIPAFPSGSGANFGTANLVIWLLFGSLYCYLSSYPILVFHATRVLDFKDVSGRVGKVGLNPYI ATLVMAVVVYVAVWWDSLLLVYCAVAAFSVLQMVRLYLVYSDIRQFGFKVGYDASVAYAYLNKLSKTRGVISESQELAET DDSAAVSKVNNSKRDLADSYKHLREHGNTAFIFFLELVMCPVFAVALHHEKGMLQFSHLSVLLLMWVFPSMLTHFLGQHL ERRYSLFRH >Mature_249_residues MVVVKWLILNVSDDLSKYIPAFPSGSGANFGTANLVIWLLFGSLYCYLSSYPILVFHATRVLDFKDVSGRVGKVGLNPYI ATLVMAVVVYVAVWWDSLLLVYCAVAAFSVLQMVRLYLVYSDIRQFGFKVGYDASVAYAYLNKLSKTRGVISESQELAET DDSAAVSKVNNSKRDLADSYKHLREHGNTAFIFFLELVMCPVFAVALHHEKGMLQFSHLSVLLLMWVFPSMLTHFLGQHL ERRYSLFRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28141; Mature: 28141
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVKWLILNVSDDLSKYIPAFPSGSGANFGTANLVIWLLFGSLYCYLSSYPILVFHATR CEEEEEEHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHH VLDFKDVSGRVGKVGLNPYIATLVMAVVVYVAVWWDSLLLVYCAVAAFSVLQMVRLYLVY HHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDIRQFGFKVGYDASVAYAYLNKLSKTRGVISESQELAETDDSAAVSKVNNSKRDLADSY HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHH KHLREHGNTAFIFFLELVMCPVFAVALHHEKGMLQFSHLSVLLLMWVFPSMLTHFLGQHL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ERRYSLFRH HHHHHHHCC >Mature Secondary Structure MVVVKWLILNVSDDLSKYIPAFPSGSGANFGTANLVIWLLFGSLYCYLSSYPILVFHATR CEEEEEEHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHH VLDFKDVSGRVGKVGLNPYIATLVMAVVVYVAVWWDSLLLVYCAVAAFSVLQMVRLYLVY HHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDIRQFGFKVGYDASVAYAYLNKLSKTRGVISESQELAETDDSAAVSKVNNSKRDLADSY HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHH KHLREHGNTAFIFFLELVMCPVFAVALHHEKGMLQFSHLSVLLLMWVFPSMLTHFLGQHL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ERRYSLFRH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA