Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237811814

Identifier: 237811814

GI number: 237811814

Start: 1486962

End: 1489736

Strand: Direct

Name: 237811814

Synonym: GBP346_A1554

Alternate gene names: NA

Gene position: 1486962-1489736 (Clockwise)

Preceding gene: 237811812

Following gene: 237811815

Centisome position: 36.28

GC content: 58.02

Gene sequence:

>2775_bases
GTGAGCATCAGTAACAACAATACCACTGTTCGGTACTCGGTCGATGCGTCTGGCGTACAGGCCGGTGTAAATCAAATCCG
GGCAGCAAACGCCCAGCTTAACGCATCGCAGATCGAAGTATTCCGCAGGCAGGAAGCCGTTACGCAGGCAATGAGAGAAG
CCGCCAGCAACGGCTACAACCTCACCGCACGCGAAGCAAAGAAGCTCGTAGACCAGTACGACCGACTCCAGGCCACAGCA
GGCAAGACGCGCCTGGAAATGCTCAACCAACAAGCCGCCGCGCGAGGCGTTACTCAGGCATTTGCAGCGCAGGCAGCGGC
TATTGCGGATGCATCGAAGAAAACGCACGAACTCAACTTGAACAGTGTTGGTGCACGGCGCGAAATGATGGTCCTCGCTC
ACGAAGCCGCAACAGGCAGTTGGAAGAACTTCGCCGGTTCCATGATGGTGATGGCGGAGCAGGTCGACGCTATGAAGTAC
GCCACGCACCCATTGGCTTTGGGGCTCGCGGCGGCCGGTACGGCAGCTTACGCGTTTTACAAGGGCATTTCCAACGCCAA
CGCACAGTACAGGGCGTTTAACGACGCGATGAACTCCACGGGCGGCTACGCGCAACAGACACGGGAATCCATCCAGGGGC
TTGCGGAGGACTTGTCCAAGCGGTTCGGTGTCGGTATCAGCGCGGCGACGAACGGGCTTAATCAACTGGTGGCGACGGGT
CGCGTAACTGCTGATATTTTCCCGCAGGTTGGGGCCGTGGCGTTGGCGATGTCGAAGTCCTCGGGAGAGGCATTCGATAA
GACCGTGGAATCGCTCTTGAAGCAGCAGGACGAGGTTAAGCGCGCGGCGGAGGAGTACCAACGCACGCACCACTCGATGT
CAGACGCCAACATGGCGCTTATCGAGTCTCTTGAAAAGACGGGCCAAAAGCATGAAGCGTTCAAGATTCTCATCCAGCAG
CAGTTGGCCGATATCGAGCGCGAAACCAAGGCCAGCACGGAGCATCAGGCAGGATTCTGGGATAACGTTACAGCCTCAAT
GCAACGCTATTCGCGCGCGCTTGCTGGTAAGTCCACTGATCTCGACATCCTCAACGACCTCAAGTCGAAGCAAGCCGCCC
AACTTGGCGGGCGTATGCCGGGGGACTACACGGATTACGGCCCGCTGATTGCCGCTCAACAGAAGATCGTTGACGCGAAC
AAGGCCAGTCAAGAGGCCGCCGCTAGAGAAGCTGCGGATAAGGCAGCATTGGCCGATTCGCTCCGGACGGTGACGGCCGA
GTACGAGCGCACGAAGTCAGCGCAGCAACACCTTAGCGATGCCGTAAAGCACGATAACGCGGTCATTGACACGCGTATTG
CGTTGCTGACGAAGCAGGGGAAGATGACCGATTCCGTGCGGGCGCAGCTTGAAGCCCAGCGAAAGCAGATGATCGCCTTC
GATACTGAACACATCACCCCGACTCGGAAACACGGTAGCGGTTCCGCCATCGCGGAGATGAACGCCGAGACTCAGACGGG
AATGGCAATTCGGCAATTGATTGAGCAGCAGGCGGAGAAGCAGTTACAGGCGCAGCGCCAGCTAGGCGTGATTGACGCCG
AGACGTATTACCGCAGGCTTACCGACCTGCAAAAATCCGCTCTGAACGACCAAATTGCACTTGCGAGCAGACGCGCCGAT
GTACTTCGATCTTCGTCAGACAAGAGGGCCTACACGGAAGCTGCGGCGGCAGTTGAAAAACTCCAGCTTCAGCAGAAGGG
CTTGGATACGAGTCTGCAAGATACGTTGACGGGTCTGTCGCAGCGACGTGACATCGATGTGCGCCGGTACGTCATGGGCC
TGGGCCAGATGAATACGCAGCAGGAGGATGCGTACCAATATCAGGACACAACCCGCAACATGACCGCACGGGCCAAGGCC
GAATTCGACGCACGGTACGCGTTGCAACAGCAGTATCAGCAGCGCGTTCGGCAGTTGGTCGAACAATACGCGCTCGATCC
TACCTCGGATATGAAGCAATACGCGGAAAAACTCCGAGCGGAACAGGCGTATCTCGCGGAGCGTAGCGCAGGAATGGAAC
GATTCTTTGTCCGTGAGGAGGCGCGGCGTAATAGCTTCGCGGCTCAGATGAAAGACGGTCTATTGTCTCTCGGCGGTGAC
GCCATGACTAACGCGGAGCTTGCCCGGACTGCCCTTGTAACTGCGTGGCAGGATTCGCAGAGCGCTTTGGAGCAATTCAT
TACGAGCGGCGAGGGAAATTTCAAGAAGTTCACGGCGAGCATTCTGGGCGACCTTGCGAAAATCGCGTTGCGCCAAGCCG
AAGTGTTCGCGATCCAGAGCATCAGCAGTTCGTTCGGCTCATTCTTTAGCGAGGGCGGCCCGGTGCTGCACCGCGCAGGC
GGCGGCCCCATCGCCGGCCCAGGCACAACGACCAGTGACAGCATTCCCGCGATGCTTTCGAACGGGGAATTCGTCATCAA
TGCAGCGTCTACGAGGAAATACCGCAGCCTGCTTGAGTCCATCAACTCGGGCCACATGGCGCACTTTGCGACCGGAGGCA
TTGCAAGTTCTCTTGCACCATCTCCGGCCCCTATGTCGGGTGGCGGTGATAGGCCTCACTTTACCGTCAATCTGAACGGA
GGGCACGGCGGATTAACTGAGGCTGACGTGGCGTCCCTGGTTACGCAATTCCAGTCGATCGTGGATGTTCAGCTACACAA
GCGGATGGCGGAGCAGGGCGGATATGCATACAAGATGAGGTACGGCCTGCTGTAA

Upstream 100 bases:

>100_bases
CGAAGCCGTTCATCCGGCCAGCCTTTGAAGCTATGAAGCAGCGGGCGGCGGATCGATCTACAGAGGTAATCCATGCAGCA
CTCAACAAGAAAGGAGGTAA

Downstream 100 bases:

>100_bases
CTGACCAGTGCCGCGAACCCGTCGAAGCCGGGGGCGGGTTCGTTCTTGATCTTACAGGAATCAACCACTAACAATAAGGA
CTGCGTTGCAAAAATCGTTC

Product: putative phage HK97 tail length tape measure-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 924; Mature: 923

Protein sequence:

>924_residues
MSISNNNTTVRYSVDASGVQAGVNQIRAANAQLNASQIEVFRRQEAVTQAMREAASNGYNLTAREAKKLVDQYDRLQATA
GKTRLEMLNQQAAARGVTQAFAAQAAAIADASKKTHELNLNSVGARREMMVLAHEAATGSWKNFAGSMMVMAEQVDAMKY
ATHPLALGLAAAGTAAYAFYKGISNANAQYRAFNDAMNSTGGYAQQTRESIQGLAEDLSKRFGVGISAATNGLNQLVATG
RVTADIFPQVGAVALAMSKSSGEAFDKTVESLLKQQDEVKRAAEEYQRTHHSMSDANMALIESLEKTGQKHEAFKILIQQ
QLADIERETKASTEHQAGFWDNVTASMQRYSRALAGKSTDLDILNDLKSKQAAQLGGRMPGDYTDYGPLIAAQQKIVDAN
KASQEAAAREAADKAALADSLRTVTAEYERTKSAQQHLSDAVKHDNAVIDTRIALLTKQGKMTDSVRAQLEAQRKQMIAF
DTEHITPTRKHGSGSAIAEMNAETQTGMAIRQLIEQQAEKQLQAQRQLGVIDAETYYRRLTDLQKSALNDQIALASRRAD
VLRSSSDKRAYTEAAAAVEKLQLQQKGLDTSLQDTLTGLSQRRDIDVRRYVMGLGQMNTQQEDAYQYQDTTRNMTARAKA
EFDARYALQQQYQQRVRQLVEQYALDPTSDMKQYAEKLRAEQAYLAERSAGMERFFVREEARRNSFAAQMKDGLLSLGGD
AMTNAELARTALVTAWQDSQSALEQFITSGEGNFKKFTASILGDLAKIALRQAEVFAIQSISSSFGSFFSEGGPVLHRAG
GGPIAGPGTTTSDSIPAMLSNGEFVINAASTRKYRSLLESINSGHMAHFATGGIASSLAPSPAPMSGGGDRPHFTVNLNG
GHGGLTEADVASLVTQFQSIVDVQLHKRMAEQGGYAYKMRYGLL

Sequences:

>Translated_924_residues
MSISNNNTTVRYSVDASGVQAGVNQIRAANAQLNASQIEVFRRQEAVTQAMREAASNGYNLTAREAKKLVDQYDRLQATA
GKTRLEMLNQQAAARGVTQAFAAQAAAIADASKKTHELNLNSVGARREMMVLAHEAATGSWKNFAGSMMVMAEQVDAMKY
ATHPLALGLAAAGTAAYAFYKGISNANAQYRAFNDAMNSTGGYAQQTRESIQGLAEDLSKRFGVGISAATNGLNQLVATG
RVTADIFPQVGAVALAMSKSSGEAFDKTVESLLKQQDEVKRAAEEYQRTHHSMSDANMALIESLEKTGQKHEAFKILIQQ
QLADIERETKASTEHQAGFWDNVTASMQRYSRALAGKSTDLDILNDLKSKQAAQLGGRMPGDYTDYGPLIAAQQKIVDAN
KASQEAAAREAADKAALADSLRTVTAEYERTKSAQQHLSDAVKHDNAVIDTRIALLTKQGKMTDSVRAQLEAQRKQMIAF
DTEHITPTRKHGSGSAIAEMNAETQTGMAIRQLIEQQAEKQLQAQRQLGVIDAETYYRRLTDLQKSALNDQIALASRRAD
VLRSSSDKRAYTEAAAAVEKLQLQQKGLDTSLQDTLTGLSQRRDIDVRRYVMGLGQMNTQQEDAYQYQDTTRNMTARAKA
EFDARYALQQQYQQRVRQLVEQYALDPTSDMKQYAEKLRAEQAYLAERSAGMERFFVREEARRNSFAAQMKDGLLSLGGD
AMTNAELARTALVTAWQDSQSALEQFITSGEGNFKKFTASILGDLAKIALRQAEVFAIQSISSSFGSFFSEGGPVLHRAG
GGPIAGPGTTTSDSIPAMLSNGEFVINAASTRKYRSLLESINSGHMAHFATGGIASSLAPSPAPMSGGGDRPHFTVNLNG
GHGGLTEADVASLVTQFQSIVDVQLHKRMAEQGGYAYKMRYGLL
>Mature_923_residues
SISNNNTTVRYSVDASGVQAGVNQIRAANAQLNASQIEVFRRQEAVTQAMREAASNGYNLTAREAKKLVDQYDRLQATAG
KTRLEMLNQQAAARGVTQAFAAQAAAIADASKKTHELNLNSVGARREMMVLAHEAATGSWKNFAGSMMVMAEQVDAMKYA
THPLALGLAAAGTAAYAFYKGISNANAQYRAFNDAMNSTGGYAQQTRESIQGLAEDLSKRFGVGISAATNGLNQLVATGR
VTADIFPQVGAVALAMSKSSGEAFDKTVESLLKQQDEVKRAAEEYQRTHHSMSDANMALIESLEKTGQKHEAFKILIQQQ
LADIERETKASTEHQAGFWDNVTASMQRYSRALAGKSTDLDILNDLKSKQAAQLGGRMPGDYTDYGPLIAAQQKIVDANK
ASQEAAAREAADKAALADSLRTVTAEYERTKSAQQHLSDAVKHDNAVIDTRIALLTKQGKMTDSVRAQLEAQRKQMIAFD
TEHITPTRKHGSGSAIAEMNAETQTGMAIRQLIEQQAEKQLQAQRQLGVIDAETYYRRLTDLQKSALNDQIALASRRADV
LRSSSDKRAYTEAAAAVEKLQLQQKGLDTSLQDTLTGLSQRRDIDVRRYVMGLGQMNTQQEDAYQYQDTTRNMTARAKAE
FDARYALQQQYQQRVRQLVEQYALDPTSDMKQYAEKLRAEQAYLAERSAGMERFFVREEARRNSFAAQMKDGLLSLGGDA
MTNAELARTALVTAWQDSQSALEQFITSGEGNFKKFTASILGDLAKIALRQAEVFAIQSISSSFGSFFSEGGPVLHRAGG
GPIAGPGTTTSDSIPAMLSNGEFVINAASTRKYRSLLESINSGHMAHFATGGIASSLAPSPAPMSGGGDRPHFTVNLNGG
HGGLTEADVASLVTQFQSIVDVQLHKRMAEQGGYAYKMRYGLL

Specific function: Unknown

COG id: COG5281

COG function: function code S; Phage-related minor tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100425; Mature: 100293

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISNNNTTVRYSVDASGVQAGVNQIRAANAQLNASQIEVFRRQEAVTQAMREAASNGYN
CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LTAREAKKLVDQYDRLQATAGKTRLEMLNQQAAARGVTQAFAAQAAAIADASKKTHELNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
NSVGARREMMVLAHEAATGSWKNFAGSMMVMAEQVDAMKYATHPLALGLAAAGTAAYAFY
CCCCCHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KGISNANAQYRAFNDAMNSTGGYAQQTRESIQGLAEDLSKRFGVGISAATNGLNQLVATG
HCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
RVTADIFPQVGAVALAMSKSSGEAFDKTVESLLKQQDEVKRAAEEYQRTHHSMSDANMAL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IESLEKTGQKHEAFKILIQQQLADIERETKASTEHQAGFWDNVTASMQRYSRALAGKSTD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
LDILNDLKSKQAAQLGGRMPGDYTDYGPLIAAQQKIVDANKASQEAAAREAADKAALADS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRTVTAEYERTKSAQQHLSDAVKHDNAVIDTRIALLTKQGKMTDSVRAQLEAQRKQMIAF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
DTEHITPTRKHGSGSAIAEMNAETQTGMAIRQLIEQQAEKQLQAQRQLGVIDAETYYRRL
CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
TDLQKSALNDQIALASRRADVLRSSSDKRAYTEAAAAVEKLQLQQKGLDTSLQDTLTGLS
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QRRDIDVRRYVMGLGQMNTQQEDAYQYQDTTRNMTARAKAEFDARYALQQQYQQRVRQLV
HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQYALDPTSDMKQYAEKLRAEQAYLAERSAGMERFFVREEARRNSFAAQMKDGLLSLGGD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AMTNAELARTALVTAWQDSQSALEQFITSGEGNFKKFTASILGDLAKIALRQAEVFAIQS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSSFGSFFSEGGPVLHRAGGGPIAGPGTTTSDSIPAMLSNGEFVINAASTRKYRSLLES
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCEEEECHHHHHHHHHHHH
INSGHMAHFATGGIASSLAPSPAPMSGGGDRPHFTVNLNGGHGGLTEADVASLVTQFQSI
HCCCCEEHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
VDVQLHKRMAEQGGYAYKMRYGLL
HHHHHHHHHHHHCCEEEEEECCCC
>Mature Secondary Structure 
SISNNNTTVRYSVDASGVQAGVNQIRAANAQLNASQIEVFRRQEAVTQAMREAASNGYN
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LTAREAKKLVDQYDRLQATAGKTRLEMLNQQAAARGVTQAFAAQAAAIADASKKTHELNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
NSVGARREMMVLAHEAATGSWKNFAGSMMVMAEQVDAMKYATHPLALGLAAAGTAAYAFY
CCCCCHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KGISNANAQYRAFNDAMNSTGGYAQQTRESIQGLAEDLSKRFGVGISAATNGLNQLVATG
HCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
RVTADIFPQVGAVALAMSKSSGEAFDKTVESLLKQQDEVKRAAEEYQRTHHSMSDANMAL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IESLEKTGQKHEAFKILIQQQLADIERETKASTEHQAGFWDNVTASMQRYSRALAGKSTD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
LDILNDLKSKQAAQLGGRMPGDYTDYGPLIAAQQKIVDANKASQEAAAREAADKAALADS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRTVTAEYERTKSAQQHLSDAVKHDNAVIDTRIALLTKQGKMTDSVRAQLEAQRKQMIAF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
DTEHITPTRKHGSGSAIAEMNAETQTGMAIRQLIEQQAEKQLQAQRQLGVIDAETYYRRL
CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
TDLQKSALNDQIALASRRADVLRSSSDKRAYTEAAAAVEKLQLQQKGLDTSLQDTLTGLS
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QRRDIDVRRYVMGLGQMNTQQEDAYQYQDTTRNMTARAKAEFDARYALQQQYQQRVRQLV
HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQYALDPTSDMKQYAEKLRAEQAYLAERSAGMERFFVREEARRNSFAAQMKDGLLSLGGD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AMTNAELARTALVTAWQDSQSALEQFITSGEGNFKKFTASILGDLAKIALRQAEVFAIQS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSSFGSFFSEGGPVLHRAGGGPIAGPGTTTSDSIPAMLSNGEFVINAASTRKYRSLLES
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCEEEECHHHHHHHHHHHH
INSGHMAHFATGGIASSLAPSPAPMSGGGDRPHFTVNLNGGHGGLTEADVASLVTQFQSI
HCCCCEEHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
VDVQLHKRMAEQGGYAYKMRYGLL
HHHHHHHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA