| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811803
Identifier: 237811803
GI number: 237811803
Start: 1475644
End: 1475835
Strand: Direct
Name: 237811803
Synonym: GBP346_A1542
Alternate gene names: NA
Gene position: 1475644-1475835 (Clockwise)
Preceding gene: 237811800
Following gene: 237811807
Centisome position: 36.0
GC content: 72.4
Gene sequence:
>192_bases ATGACTCGCATTGTCATCATCGCGCTCGTGGCGGCCGTGCTCGCCGGTTGCGCGAGCGATCCCAGGCAGGGCCGCCGCGG CACGCCGCCGCAAGATCCGCCCGACTATCAGGGCGTGCCGACCGACATGACGCCGCCGTCGATGCTCGGCGAGCCCGGCA CGGGCGGGACTGCCGCGACGCCCGCGAAATAG
Upstream 100 bases:
>100_bases AGACGCGCGCCGACGTCACCGCACACCGATTTCCAGTAGACTCGCCGGGCGCGATCGGTGAGAACCGGGGCGCGATCGAC CGATCACTCCAAGGAAATCC
Downstream 100 bases:
>100_bases CCGCGATAGCGGCGGTGTAGACGCAGGCGGGCGGGACACGTGTCATGGGTGCGCCCGCCGGCAGCTTGACGCTAATGCGC GCGGATTCGGGCGTGTCTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MTRIVIIALVAAVLAGCASDPRQGRRGTPPQDPPDYQGVPTDMTPPSMLGEPGTGGTAATPAK
Sequences:
>Translated_63_residues MTRIVIIALVAAVLAGCASDPRQGRRGTPPQDPPDYQGVPTDMTPPSMLGEPGTGGTAATPAK >Mature_62_residues TRIVIIALVAAVLAGCASDPRQGRRGTPPQDPPDYQGVPTDMTPPSMLGEPGTGGTAATPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6358; Mature: 6227
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIVIIALVAAVLAGCASDPRQGRRGTPPQDPPDYQGVPTDMTPPSMLGEPGTGGTAAT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAK CCC >Mature Secondary Structure TRIVIIALVAAVLAGCASDPRQGRRGTPPQDPPDYQGVPTDMTPPSMLGEPGTGGTAAT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA