| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811800
Identifier: 237811800
GI number: 237811800
Start: 1474128
End: 1474946
Strand: Direct
Name: 237811800
Synonym: GBP346_A1539
Alternate gene names: NA
Gene position: 1474128-1474946 (Clockwise)
Preceding gene: 237811799
Following gene: 237811803
Centisome position: 35.97
GC content: 68.01
Gene sequence:
>819_bases ATGCGAGAACTGCCGACGCCTACGCTCCCTTTTGCCTCGCTGCCTCTTGACCTGCCGCGCCGCCGGTTGCCGCGCGCGGC CGAGACGGTCACCGCCGAGTTCCGCTTGCGTGCCGCATGGGCGCGCACCGAAGACGAGTTGCGCGAAGCGCAGCGGCTGC GCCACAGTGTGTTCGCCGAGGAAATGGGCGCGCACGTGAGCGGCCCGGCGGGCCTCGACGTCGATCCGTTCGACCCGTAC TGCGATCACCTGCTCGTGCGCGATCTCGACACGCTGAAGGTCGTCGGCACCTATCGCGTGCTGCCGCCGCATCAGGCGGC GCGTGTCGGCCGCCTGTACGCGGAGGGCGAGTTCGATCTGTCTCGCCTGACGCATCTGCGCTCGAAGATGGTCGAAGTCG GCCGCTCGTGCGTGCATCGCGATTATCGCAGCGGCGCCGTCATCATGGCGCTGTGGGGCGGCCTCGGCACCTACATGCTG CAAAACGGCTATGAGACGATGCTCGGTTGCGCGAGCGTGTCGATGGCCGACGGCGGCCATTACGCGGCGAATCTGTATCA ATCGCTCGGCGACGCGCTGACGGCGCCCGAGTACCGCGCGTTCCCGCACACGCCGCTGCCCGTCGACGAGTTGCAGACCG GCGCGAAGGTCGCGCCGCCGCCGCTCATCAAGGGTTATCTGCGGCTCGGCGCGAAGATCTGCGGCGCACCCGCGTGGGAT CCCGACTTCAATTGCGCGGATTTTCTCACGCTGTTCCGCCTGTCGGACATCAATGCCCGCTACGCGCGCCACTTCCTGAG CGATCCGCTGCCGCGCTGA
Upstream 100 bases:
>100_bases GACACGTCACCGAATGGACACCGTTTTGCCACATAAGCGTCACGGCCGGTTACTACATTGGCGGGCATGTCGTCTCCTTC CTTACGACCAGGAAAGCCTA
Downstream 100 bases:
>100_bases CACGCCCCGGCGCGCGCAACGATCGGCCCGCACGCCACGACGGCACGGCGATTGCGTCGCCGTGCCGTTTTTTTACCTGT GAGCCTGTTCGGCGAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRELPTPTLPFASLPLDLPRRRLPRAAETVTAEFRLRAAWARTEDELREAQRLRHSVFAEEMGAHVSGPAGLDVDPFDPY CDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDLSRLTHLRSKMVEVGRSCVHRDYRSGAVIMALWGGLGTYML QNGYETMLGCASVSMADGGHYAANLYQSLGDALTAPEYRAFPHTPLPVDELQTGAKVAPPPLIKGYLRLGAKICGAPAWD PDFNCADFLTLFRLSDINARYARHFLSDPLPR
Sequences:
>Translated_272_residues MRELPTPTLPFASLPLDLPRRRLPRAAETVTAEFRLRAAWARTEDELREAQRLRHSVFAEEMGAHVSGPAGLDVDPFDPY CDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDLSRLTHLRSKMVEVGRSCVHRDYRSGAVIMALWGGLGTYML QNGYETMLGCASVSMADGGHYAANLYQSLGDALTAPEYRAFPHTPLPVDELQTGAKVAPPPLIKGYLRLGAKICGAPAWD PDFNCADFLTLFRLSDINARYARHFLSDPLPR >Mature_272_residues MRELPTPTLPFASLPLDLPRRRLPRAAETVTAEFRLRAAWARTEDELREAQRLRHSVFAEEMGAHVSGPAGLDVDPFDPY CDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDLSRLTHLRSKMVEVGRSCVHRDYRSGAVIMALWGGLGTYML QNGYETMLGCASVSMADGGHYAANLYQSLGDALTAPEYRAFPHTPLPVDELQTGAKVAPPPLIKGYLRLGAKICGAPAWD PDFNCADFLTLFRLSDINARYARHFLSDPLPR
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30244; Mature: 30244
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELPTPTLPFASLPLDLPRRRLPRAAETVTAEFRLRAAWARTEDELREAQRLRHSVFAE CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EMGAHVSGPAGLDVDPFDPYCDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDL HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEHEEECCCCHHHHHHHHHHCCCCCCH SRLTHLRSKMVEVGRSCVHRDYRSGAVIMALWGGLGTYMLQNGYETMLGCASVSMADGGH HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCH YAANLYQSLGDALTAPEYRAFPHTPLPVDELQTGAKVAPPPLIKGYLRLGAKICGAPAWD HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC PDFNCADFLTLFRLSDINARYARHFLSDPLPR CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure MRELPTPTLPFASLPLDLPRRRLPRAAETVTAEFRLRAAWARTEDELREAQRLRHSVFAE CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EMGAHVSGPAGLDVDPFDPYCDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDL HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEHEEECCCCHHHHHHHHHHCCCCCCH SRLTHLRSKMVEVGRSCVHRDYRSGAVIMALWGGLGTYMLQNGYETMLGCASVSMADGGH HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCH YAANLYQSLGDALTAPEYRAFPHTPLPVDELQTGAKVAPPPLIKGYLRLGAKICGAPAWD HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC PDFNCADFLTLFRLSDINARYARHFLSDPLPR CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA