Click here to switch to the map view.

The map label for this gene is yafS [H]

Identifier: 237811763

GI number: 237811763

Start: 1436901

End: 1437767

Strand: Reverse

Name: yafS [H]

Synonym: GBP346_A1501

Alternate gene names: 237811763

Gene position: 1437767-1436901 (Counterclockwise)

Preceding gene: 237811767

Following gene: 237811762

Centisome position: 35.08

GC content: 68.51

Gene sequence:

>867_bases
ATGCCGGCACCGGCACGTATTCCAGCTCGTTCATGGGCGCGCAATCACCGAGATATGTCTGACCGTTCGATTATAGACTG
GCCCGCCTGGACCGACTCCCCGCCCGGGCGCTATGTGCTTGGCTGGGAGCAGGCGCAGCTCGACCGCACCGTGTCCGACG
TGTTCGGCTTTCACGCGCTGCAGCTCGGGCTGCCGCAGCTCGACGCGCTGCGCGAGAACCGCATGCCGTGCCGCGGCCTC
GTGCTCGATCCGGCAAGCGGCGCGAGCGCGCCCTATCACTACCCGTGGGCGCGCGAGGCGCGCAGCGCCGAGCACGCGCC
CGCCGGGCGCAGCACCGTGTGGTGCGACCTGCTCGATCTGCCGTTCGAATCGCAGAGCGTCGATCTGATCGTGATGCCGC
ACACGCTCGAATTCACGTCCGATCCGCACCGGCTGCTGCGCGAGGCCGAGCGCGTGCTGATGCCGGAAGGCCAGCTCGTG
ATCACGGGCTTCAATTCGCTGAGCCTCTGGGGCGCGCGGCATTCGGTCGGCAAGATGGCGAAGCGCCCGTTCGTCCCCGC
GACGCGCGACCAGATCACGTTCATCCGGCTGAAGGACTGGATCAAGCTGCTCGGCTTCGATCTCGAGCGCGGCCGCTTCG
GCTGCTACCGGCCGCCGCTCGCCACCGACAAGTGGCTGTCCCGCTACGCGTTCATGGAGGCGGCGGGCGACCGCTGGTGG
CCGATCTTCGGCGCCGTCTACATGGTGACGGCGATCAAGCGCGTGCGCGGGATGCGGCTCGTCGGCCCGATCAAGATGAA
GAAGCCGGTGCTCGCGCCGGGCCTCACGCCCGCCGCCACCCCGACCACTCACCAAGAACATTCATGA

Upstream 100 bases:

>100_bases
CCTCGCGCGTCGAGATGGCGGCGCACCGGCGCGGCTTCGCCCGGATCGACGGCGACCGCCTGGCGGCCGTCCGACACGAG
CCAGATGTAGTTGTCGTCGA

Downstream 100 bases:

>100_bases
CGTTGCAAACCATCGACATCTATACCGACGGCGCCTGCAAGGGCAACCCCGGCCCGGGCGGCTGGGGCGCGCTGCTGCGC
TACGGCGCGCAGGAGAAAGA

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPAPARIPARSWARNHRDMSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCRGL
VLDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLV
ITGFNSLSLWGARHSVGKMAKRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWW
PIFGAVYMVTAIKRVRGMRLVGPIKMKKPVLAPGLTPAATPTTHQEHS

Sequences:

>Translated_288_residues
MPAPARIPARSWARNHRDMSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCRGL
VLDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLV
ITGFNSLSLWGARHSVGKMAKRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWW
PIFGAVYMVTAIKRVRGMRLVGPIKMKKPVLAPGLTPAATPTTHQEHS
>Mature_287_residues
PAPARIPARSWARNHRDMSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCRGLV
LDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVI
TGFNSLSLWGARHSVGKMAKRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWWP
IFGAVYMVTAIKRVRGMRLVGPIKMKKPVLAPGLTPAATPTTHQEHS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=266, Percent_Identity=30.0751879699248, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 32599; Mature: 32468

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPARIPARSWARNHRDMSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHAL
CCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
QLGLPQLDALRENRMPCRGLVLDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDL
HHCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECC
PFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGKMA
CCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHHHHHHH
KRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWW
HCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH
PIFGAVYMVTAIKRVRGMRLVGPIKMKKPVLAPGLTPAATPTTHQEHS
HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAPARIPARSWARNHRDMSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHAL
CCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
QLGLPQLDALRENRMPCRGLVLDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDL
HHCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECC
PFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGKMA
CCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHHHHHHH
KRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWW
HCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH
PIFGAVYMVTAIKRVRGMRLVGPIKMKKPVLAPGLTPAATPTTHQEHS
HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]