| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is proP [H]
Identifier: 237811758
GI number: 237811758
Start: 1432934
End: 1434421
Strand: Reverse
Name: proP [H]
Synonym: GBP346_A1495
Alternate gene names: 237811758
Gene position: 1434421-1432934 (Counterclockwise)
Preceding gene: 237811761
Following gene: 237811743
Centisome position: 35.0
GC content: 70.23
Gene sequence:
>1488_bases TTGACTGCAACACCCGCCCCCTCCAGTTCGTCCAGCGCGCCCACCGAAGGCGCGCTTCCCGCCGCTGCGCACGAGATCAC CGTCGTCGATCAGGGCCTGCTCAAGCGCGCCGTCGGCGCGATGGCGCTCGGCAACGCGATGGAATGGTTCGACTTCGGCG TCTACAGCTACATCGCCGTCACGCTCGGCCAGGTGTTCTTCCCGTCGAGCAGCCCGTCCGCGCAGTTGCTCGCGACGTTC GGCACGTTCGCCGCCGCCTTCCTCGTGCGCCCGCTCGGCGGGATGGTGTTCGGGCCGCTCGGCGATCGCATCGGCCGCCA GCGCGTGCTCGCGATGACGATGATCATGATGGCGGTCGGCACGTTCGCGATCGGCCTGATCCCGAGCTACGACTCGATCG GCCTCCTCGCGCCCGTGCTGCTCCTCGTCGCGCGTCTCGTGCAAGGCTTCTCGACGGGCGGCGAGTACGGCGGCGCGGCA ACCTTCATCGCCGAGTTCTCGACCGACAAGCGCCGCGGCTTCATGGGCAGCTTCCTCGAGTTCGGCACGCTGATCGGCTA TGTGATGGGCGCGGGCGTCGTCGCGCTGCTGACGGCTTCGCTGTCGCACGACGCGCTGCTGTCGTGGGGCTGGCGCGTGC CGTTCCTGATCGCCGGCCCGCTCGGCCTGATCGGCCTGTACATCCGGATGAGGCTCGAGGAAACGCCCGCGTTCAAGCGG CAGGCCGAAGCGCGCGAAGCGCAGGACAAGGCCGTGCCGAAGGCGCATTTCCGCCGACAGCTCGCGCGGCACTGGCGCGC GCTGCTGCTGTGCGTCGGCCTCGTGCTGATCTTCAACGTCACCGATTACATGGCGCTGTCGTACCTGCCGAGCTATCTGT CGTCGACGCTGCACTTCGACGAGGCGCACGGCCTCGTGCTGATCCTGATCGTGATGGTGCTGATGATGCCGATGACGCTC GCCACGGGCCGCCTGTCGGACGCCGTCGGCCGCAAGCCGGTGATGCTCGCCGGCTGCGTCGGGCTCTTCGCGCTCGCGAT TCCCGCGCTGCTCCTGATCCGCACCGGCGAGACGGCGCTCGTGTTCGGCGGCCTGCTGATCCTCGGCGCACTGCTGTCGT GCTTCACGGGCGTGATGCCGTCGGCGCTGCCCGCGCTCTTTCCGACCGAGATCCGCTACGGCGCGCTCGCGATCGGCTTC AACGTGTCGGTGTCGCTGTTCGGCGGCACGACGCCGCTCGCCGCCGCGTGGCTCGTCGACGCGACGGGCAACCTGATGAT GCCCGCGTACTACCTGATGGGCGCGGCCGTGATCGGCGCGATCTCGGTGCTCGCGCTGCCCGAGAGCGCGCGCCAGCCGC TCAAGGGCTCGCCGCCCGCCGTCGCGTCGCACCGCGAGGCACACGCGCTCGCGCGCGAGATCAAGCGCCGCGAGGCGGCC GAGCGCGACAACAGCGGCTACCCGTCGGCCGCGGCGTTGCGCGCGTGA
Upstream 100 bases:
>100_bases CGCGACCGACCCTCGTCCGATCGCGAGCGGCACTCCCGGCAAACCGTGGCGAACCGCGCCCCGTCGCGCGGTTCGGCCGC CGTCACAGGAGTTTTCGACC
Downstream 100 bases:
>100_bases GGTTCGGCCGCCGCGACGCCGCCGTGTAGGCGCGTCGCTCGATGACGGACCGCGGAGGCGGTCTCGCGATGCCCGTCGGG CGTGGCGAGACCGCCTCCGC
Product: major facilitator family transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MTATPAPSSSSSAPTEGALPAAAHEITVVDQGLLKRAVGAMALGNAMEWFDFGVYSYIAVTLGQVFFPSSSPSAQLLATF GTFAAAFLVRPLGGMVFGPLGDRIGRQRVLAMTMIMMAVGTFAIGLIPSYDSIGLLAPVLLLVARLVQGFSTGGEYGGAA TFIAEFSTDKRRGFMGSFLEFGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMRLEETPAFKR QAEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYLPSYLSSTLHFDEAHGLVLILIVMVLMMPMTL ATGRLSDAVGRKPVMLAGCVGLFALAIPALLLIRTGETALVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGF NVSVSLFGGTTPLAAAWLVDATGNLMMPAYYLMGAAVIGAISVLALPESARQPLKGSPPAVASHREAHALAREIKRREAA ERDNSGYPSAAALRA
Sequences:
>Translated_495_residues MTATPAPSSSSSAPTEGALPAAAHEITVVDQGLLKRAVGAMALGNAMEWFDFGVYSYIAVTLGQVFFPSSSPSAQLLATF GTFAAAFLVRPLGGMVFGPLGDRIGRQRVLAMTMIMMAVGTFAIGLIPSYDSIGLLAPVLLLVARLVQGFSTGGEYGGAA TFIAEFSTDKRRGFMGSFLEFGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMRLEETPAFKR QAEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYLPSYLSSTLHFDEAHGLVLILIVMVLMMPMTL ATGRLSDAVGRKPVMLAGCVGLFALAIPALLLIRTGETALVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGF NVSVSLFGGTTPLAAAWLVDATGNLMMPAYYLMGAAVIGAISVLALPESARQPLKGSPPAVASHREAHALAREIKRREAA ERDNSGYPSAAALRA >Mature_494_residues TATPAPSSSSSAPTEGALPAAAHEITVVDQGLLKRAVGAMALGNAMEWFDFGVYSYIAVTLGQVFFPSSSPSAQLLATFG TFAAAFLVRPLGGMVFGPLGDRIGRQRVLAMTMIMMAVGTFAIGLIPSYDSIGLLAPVLLLVARLVQGFSTGGEYGGAAT FIAEFSTDKRRGFMGSFLEFGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMRLEETPAFKRQ AEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYLPSYLSSTLHFDEAHGLVLILIVMVLMMPMTLA TGRLSDAVGRKPVMLAGCVGLFALAIPALLLIRTGETALVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFN VSVSLFGGTTPLAAAWLVDATGNLMMPAYYLMGAAVIGAISVLALPESARQPLKGSPPAVASHREAHALAREIKRREAAE RDNSGYPSAAALRA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=475, Percent_Identity=51.1578947368421, Blast_Score=515, Evalue=1e-147, Organism=Escherichia coli, GI1788292, Length=444, Percent_Identity=31.5315315315315, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1788942, Length=382, Percent_Identity=34.8167539267016, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1789941, Length=439, Percent_Identity=34.1685649202733, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI87082231, Length=210, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI87082404, Length=365, Percent_Identity=24.6575342465753, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 52256; Mature: 52125
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPAPSSSSSAPTEGALPAAAHEITVVDQGLLKRAVGAMALGNAMEWFDFGVYSYIAV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRVLAMTMIMMAVG HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHH TFAIGLIPSYDSIGLLAPVLLLVARLVQGFSTGGEYGGAATFIAEFSTDKRRGFMGSFLE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH FGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMRLEETPAFKR HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH QAEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYLPSYLSSTLHFD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCVGLFALAIPALLLIRTGETAL HHCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH VFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGGTTPLAAAWLVD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEECEEEEEEECCCCHHHHHHHHH ATGNLMMPAYYLMGAAVIGAISVLALPESARQPLKGSPPAVASHREAHALAREIKRREAA CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERDNSGYPSAAALRA HCCCCCCCCHHHCCC >Mature Secondary Structure TATPAPSSSSSAPTEGALPAAAHEITVVDQGLLKRAVGAMALGNAMEWFDFGVYSYIAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRVLAMTMIMMAVG HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHH TFAIGLIPSYDSIGLLAPVLLLVARLVQGFSTGGEYGGAATFIAEFSTDKRRGFMGSFLE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH FGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMRLEETPAFKR HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH QAEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYLPSYLSSTLHFD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCVGLFALAIPALLLIRTGETAL HHCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH VFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGGTTPLAAAWLVD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEECEEEEEEECCCCHHHHHHHHH ATGNLMMPAYYLMGAAVIGAISVLALPESARQPLKGSPPAVASHREAHALAREIKRREAA CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERDNSGYPSAAALRA HCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]