Click here to switch to the map view.

The map label for this gene is 237811733

Identifier: 237811733

GI number: 237811733

Start: 1413728

End: 1414129

Strand: Reverse

Name: 237811733

Synonym: GBP346_A1471

Alternate gene names: NA

Gene position: 1414129-1413728 (Counterclockwise)

Preceding gene: 237811734

Following gene: 237811732

Centisome position: 34.5

GC content: 67.91

Gene sequence:

>402_bases
GTGAACACCCGCAATCCAGCCGCAGAACGTCCATCCGCCGTACCCGCTCGCCGCGACGCGGGCGATGCGCCGCGCGCGCT
CACGGTCACGCCGGCCGTCGACGTATACGAAGACAAGCACGGCGTGACGCTGTGGGCCGACCTGCCCGGCGTGTCGAAGG
AGCGTCTCGAAGTGAAGATCCAGGACGGCCATCTGTCGATCGACGCGCACGCGGCGCTGCCGATGCCGGCGAGCCTGCGC
GCGCAGCACGTCGAGGTGCGCGAGCCGCATTTCGCACGCACGTTCCAGTTGAGCCCGGACTTCGACACGACGAAGATCGA
GGCGAATCTTCAGGATGGCGTATTGAAGCTGACGATCCCGAGGCGCGACGAAGCGCGCCCGCGGCGCATCGACGTGCAGT
GA

Upstream 100 bases:

>100_bases
AACGGTTGCCTGCTGATCAGCGTCGGCAAGCGCGAAGCGTCGAAGCCGCGCGCGATCACCGTGCAATGAGCCCCGTCAGT
CTCGAATCAAGGAGCCGATC

Downstream 100 bases:

>100_bases
AAAACGGCGGCGGCGCGCGCCTTCATGCGCGCCGCTGCGTGAAGTACGACGGCGCGGCGGCGCACGCATCGGGCGTGCCG
CGCGGCGCGCTCGCTTTTCG

Product: heat shock protein, Hsp20 family

Products: NA

Alternate protein names: HSP20 Family Protein; Heat Shock Protein; Small Heat Shock Protein; Hsp20 Family Heat-Shock Protein; Low Molecular Weight Heat Shock Protein; Small Heat Shock Protein Family Protein; Heat Shock Protein SP; HSP20 Family Molecular Chaperone; Molecular Chaperone; Small Heat-Shock; Heat Shock Family Protein; Heat Shock Chaperone

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKIQDGHLSIDAHAALPMPASLR
AQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIPRRDEARPRRIDVQ

Sequences:

>Translated_133_residues
MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKIQDGHLSIDAHAALPMPASLR
AQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIPRRDEARPRRIDVQ
>Mature_133_residues
MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKIQDGHLSIDAHAALPMPASLR
AQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIPRRDEARPRRIDVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14786; Mature: 14786

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKI
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCCCCEEEEEE
QDGHLSIDAHAALPMPASLRAQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIP
CCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEC
RRDEARPRRIDVQ
CCCCCCCEEECCC
>Mature Secondary Structure
MNTRNPAAERPSAVPARRDAGDAPRALTVTPAVDVYEDKHGVTLWADLPGVSKERLEVKI
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCCCCEEEEEE
QDGHLSIDAHAALPMPASLRAQHVEVREPHFARTFQLSPDFDTTKIEANLQDGVLKLTIP
CCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEC
RRDEARPRRIDVQ
CCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA