| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811726
Identifier: 237811726
GI number: 237811726
Start: 1408544
End: 1408951
Strand: Reverse
Name: 237811726
Synonym: GBP346_A1464
Alternate gene names: NA
Gene position: 1408951-1408544 (Counterclockwise)
Preceding gene: 237811727
Following gene: 237811725
Centisome position: 34.38
GC content: 72.06
Gene sequence:
>408_bases ATGAGCCCGCCGAACCGCATCCGCCTGCTGAGCGCGAGCGCCCACGGCGACGAGACGCGCGCCGCGCCCGCCCGCGACGG CGCGCCGCTCGCCATCGCGAACGACGAGGAACTGACGCCGCTTGCCGCGCGCATCGCGCGCGCGACGCGCATCGACCTGC ATTTTCCGGTGTTCACCGACGGCCGCGCATACAGCCAGGCGTACCTGCTGCGCAAGCGCTTCCGTTTCGCGGGCGAGCTG CGCGCGACGGGCGACGTGCTGATCGATCAGTTGCTGCAGCTGGAGCGCATGGGCTTTTCGAGCGCGGTGCTCGCCGACGA CGCCGATCTCGACGCCGCGCGGCGCCAGCTCGAACGGTTCGGCGGGTTCTATCAGCGCGGCGTGAGCGCGCCTGCGGACC CGCTTTAG
Upstream 100 bases:
>100_bases CCGGGCGCGTCGAACGCTTCATCGACGCGTACCGCCGCGTCGGCCCCGAGCCCTTCAAGGCCGCCGCGAACGCGGCGCGC CATCCCGAGACGAGTGTCGC
Downstream 100 bases:
>100_bases CCGCCGGCGCGCGGCGCGGCCGCCGGCTTGCGCCGCCCCGTCGCGCAAGCCGATGACGACGCGGGCACCCGGCTTGCGTA CGCGAGTACGCAAAGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSPPNRIRLLSASAHGDETRAAPARDGAPLAIANDEELTPLAARIARATRIDLHFPVFTDGRAYSQAYLLRKRFRFAGEL RATGDVLIDQLLQLERMGFSSAVLADDADLDAARRQLERFGGFYQRGVSAPADPL
Sequences:
>Translated_135_residues MSPPNRIRLLSASAHGDETRAAPARDGAPLAIANDEELTPLAARIARATRIDLHFPVFTDGRAYSQAYLLRKRFRFAGEL RATGDVLIDQLLQLERMGFSSAVLADDADLDAARRQLERFGGFYQRGVSAPADPL >Mature_134_residues SPPNRIRLLSASAHGDETRAAPARDGAPLAIANDEELTPLAARIARATRIDLHFPVFTDGRAYSQAYLLRKRFRFAGELR ATGDVLIDQLLQLERMGFSSAVLADDADLDAARRQLERFGGFYQRGVSAPADPL
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14809; Mature: 14678
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPNRIRLLSASAHGDETRAAPARDGAPLAIANDEELTPLAARIARATRIDLHFPVFTD CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEECCEEEC GRAYSQAYLLRKRFRFAGELRATGDVLIDQLLQLERMGFSSAVLADDADLDAARRQLERF CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHH GGFYQRGVSAPADPL HHHHHHCCCCCCCCC >Mature Secondary Structure SPPNRIRLLSASAHGDETRAAPARDGAPLAIANDEELTPLAARIARATRIDLHFPVFTD CCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEECCEEEC GRAYSQAYLLRKRFRFAGELRATGDVLIDQLLQLERMGFSSAVLADDADLDAARRQLERF CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHH GGFYQRGVSAPADPL HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA