| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811712
Identifier: 237811712
GI number: 237811712
Start: 1395792
End: 1396589
Strand: Direct
Name: 237811712
Synonym: GBP346_A1450
Alternate gene names: NA
Gene position: 1395792-1396589 (Clockwise)
Preceding gene: 237811711
Following gene: 237811715
Centisome position: 34.06
GC content: 72.93
Gene sequence:
>798_bases GTGCTGAACGCGACTTCGCCGCGCCGCGTGTTCGTGCCGCTCGCGATCGCGTCGATCGTCGCGGCCTGGGGCGCGTTGTG GACGTGGGACAGCAGCCCGTATGCGCGTTTTCTTCATCCCGTCGACTGGTCGGCGACGAGTCTCGCCGGGCTGTGCCGGC TGGTTCCGGCGGGCGGCGCGATCGTGCCGGCGGCGCTGCACGCCGCCGCGTGGCTGCTGATGATCGTCGCGATGATGCTG CCGACCGTGCTGCCGCTGCTGCGCACCTTCGAGCGCCTGACGGCCGCGCGGCCCGAGCGCAACCGGTTGATGCTGCTCGT CGTGCTCGGCTATCTCGCGGCATGGAGCGCGTTCGGGCTGCTCGCCCAGGCGGGCGACGCCGGCCTGCACGCGCTCGCGC GACGCGCGCCGTGGCTCGCCTGGCATGGGTGGCTCGTCGGCGCGGCCGTGCTGGCGCTCGCGGGCGCCTATCAATTCAGC CCGCTCAAGTACCGTTGCGTCGACAAGTGCCGCTCGCCGCTGATGTTCGTGAGCGAGCAGTGGCGAGGCGGGCATCCGCG GCGGGACAGTTTCGCGCTCGGCCTGCGTCACGGCCTCTTTTGCGTCGGCTGCTGCTGGATGCTGATGTGCGTGATGTTCG CGCTGGGCGCGGGCAGCGTCGGCTGGATGCTCGCGATCGGCGCGGCGATGGCGGCCGAGAAGAACCTGCCGCACGGCCGG CGGCTGAGCGCGCCGCTCGGCGTCGCGCTGCTCGGGTGGGCGGCGTCGATCGCCGTCGCGGGCATGGGCGCGGCGTGA
Upstream 100 bases:
>100_bases CTGAGCGGGCAGAACGCGATCCAGGGTTTCTTCACGTTCCGTTCGTGATGCGTAGCGTCGCGAAGCGCCGTTTCGCTTCG CCCGCGATGAAGCGCGCACC
Downstream 100 bases:
>100_bases CGCGCGGCGCCGCCGCCGCCCGGTTGCGCGAGCCCGGGCCGGCGGCCGAGCGAGCCGTCGGCCCGGGCTCGCTCGAACGT GTACGCCGGTGGCTTCGATG
Product: metal-binding integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLNATSPRRVFVPLAIASIVAAWGALWTWDSSPYARFLHPVDWSATSLAGLCRLVPAGGAIVPAALHAAAWLLMIVAMML PTVLPLLRTFERLTAARPERNRLMLLVVLGYLAAWSAFGLLAQAGDAGLHALARRAPWLAWHGWLVGAAVLALAGAYQFS PLKYRCVDKCRSPLMFVSEQWRGGHPRRDSFALGLRHGLFCVGCCWMLMCVMFALGAGSVGWMLAIGAAMAAEKNLPHGR RLSAPLGVALLGWAASIAVAGMGAA
Sequences:
>Translated_265_residues MLNATSPRRVFVPLAIASIVAAWGALWTWDSSPYARFLHPVDWSATSLAGLCRLVPAGGAIVPAALHAAAWLLMIVAMML PTVLPLLRTFERLTAARPERNRLMLLVVLGYLAAWSAFGLLAQAGDAGLHALARRAPWLAWHGWLVGAAVLALAGAYQFS PLKYRCVDKCRSPLMFVSEQWRGGHPRRDSFALGLRHGLFCVGCCWMLMCVMFALGAGSVGWMLAIGAAMAAEKNLPHGR RLSAPLGVALLGWAASIAVAGMGAA >Mature_265_residues MLNATSPRRVFVPLAIASIVAAWGALWTWDSSPYARFLHPVDWSATSLAGLCRLVPAGGAIVPAALHAAAWLLMIVAMML PTVLPLLRTFERLTAARPERNRLMLLVVLGYLAAWSAFGLLAQAGDAGLHALARRAPWLAWHGWLVGAAVLALAGAYQFS PLKYRCVDKCRSPLMFVSEQWRGGHPRRDSFALGLRHGLFCVGCCWMLMCVMFALGAGSVGWMLAIGAAMAAEKNLPHGR RLSAPLGVALLGWAASIAVAGMGAA
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28308; Mature: 28308
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNATSPRRVFVPLAIASIVAAWGALWTWDSSPYARFLHPVDWSATSLAGLCRLVPAGGA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC IVPAALHAAAWLLMIVAMMLPTVLPLLRTFERLTAARPERNRLMLLVVLGYLAAWSAFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LAQAGDAGLHALARRAPWLAWHGWLVGAAVLALAGAYQFSPLKYRCVDKCRSPLMFVSEQ HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHCCHHHHHHHH WRGGHPRRDSFALGLRHGLFCVGCCWMLMCVMFALGAGSVGWMLAIGAAMAAEKNLPHGR HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC RLSAPLGVALLGWAASIAVAGMGAA CCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNATSPRRVFVPLAIASIVAAWGALWTWDSSPYARFLHPVDWSATSLAGLCRLVPAGGA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC IVPAALHAAAWLLMIVAMMLPTVLPLLRTFERLTAARPERNRLMLLVVLGYLAAWSAFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LAQAGDAGLHALARRAPWLAWHGWLVGAAVLALAGAYQFSPLKYRCVDKCRSPLMFVSEQ HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHCCHHHHHHHH WRGGHPRRDSFALGLRHGLFCVGCCWMLMCVMFALGAGSVGWMLAIGAAMAAEKNLPHGR HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC RLSAPLGVALLGWAASIAVAGMGAA CCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA