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The map label for this gene is potC [C]

Identifier: 237811697

GI number: 237811697

Start: 1383998

End: 1385098

Strand: Reverse

Name: potC [C]

Synonym: GBP346_A1435

Alternate gene names: 237811697

Gene position: 1385098-1383998 (Counterclockwise)

Preceding gene: 237811700

Following gene: 237811696

Centisome position: 33.79

GC content: 72.12

Gene sequence:

>1101_bases
ATGCATTCGACGAGGCGCAGAACGACCGACGATCGACGCGCGCGCGCCGCCCAGGCGATGTCGCGCCGCGCGGCGCACCT
CGCCTGCGCGCTCCCCGTCGCCGCGCGCGGTGCCGTCATCAGTTCTTCATCGACGCCGCCGATAATCCTCGTCGACGAAA
ACGTTTACATCGCATTGCGCACGCCCATGACGCCTCCCTCGAAGGACGCCGCCGCCCTCGCCCGCCCCGCCGCCGCGGCC
GGCCCGCACGCGCCCCCCGCCGTCCGCCGCGCACGCCGCGCGCCGCTCGACTGGCTCGCCGCCGCGCAATGGGCGGTCAC
GCTCGCGCTGTGCGCGTTCCTGATCGTACCCGTCGCGATGTCGGTGCTCGCCGGGCTCACGGTCAATTATTTTCGCGGGC
CGTCGAGCGGGCTCACGCTGCGCTGGCTCGGCGAGGTGTGGGCGCAATATCACGGCTCGGTATTCCTGTCGCTCGAAGTC
GCGCTCGCGACGCTCGCCGTCACGCTCGTCGCGGGCGTGCCCGCCGGCTACGCGCTCGCGCGCAGCCGCAGCCGCGTCTC
GCGCCTGATCGAGGAGGCGCTCGTGCTGCCCGTCGCGCTGCCGGGCCTCGCGTCCGCGCTCGCACTGCTGAGCGTCTACG
GCGGCTTCGCCGCGTTCCGCACGAGCCTGTGGTTCATCGTCGTCGGCCACGTCGTGTTCACGCTGCCGTTCATGGTCCGC
GCGGTTGCGGCCGTCGCCGCGCGCGCCGATCTGCGCACGCTCGAGGAAGGCGCGGCGAGCCTCGGCGCATCGTTCGCCAC
GCGCTTCGCGACGATCGTGCTGCCGAACCTGCGCCCGGGCATCGTCGCCGGCGCGCTCGCGGTGCTCACGCTGTCGATCG
GCGAATTCAACCTCACGTGGATGCTCCACACGCCCGACACGAAGACGCTGCCTGTCGGCCTCGCCGATACGTACGCGTCA
CTGCGCCTCGAAATCGGCAGCGCGTACACGATCCTGTTCCTGCTGATGACGCTGCCGCTGCTCGTCGCGATGCAACGGCT
CGGCGTCGAGCCGCCGGGCGCGCGCGATCGCACACGCGATCGCACGTGCAAGCGCCGCTGA

Upstream 100 bases:

>100_bases
GCGCGCATCGCCGCCATGACCGCAATCGCCACGCACGACGCCGCGCGAGCCGTCTCGCGCTCTTCATTCAAACGTTTAAA
ACTACGGGATCGTTCCGCGC

Downstream 100 bases:

>100_bases
TGGACCGGCGCCGCCGCGCCGCCTTCGCGATGCCTGTGCGCGCGGCGCTTTCGTTGCGCCCTCGCCGCGCTTTCGTTGCA
CCGCCGTTGTTTTCGGCCTT

Product: ABC transporter, permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC-Type Transporter Permease Component; Spermidine/Putrescine ABC Transporter Permease; ABC Transporter Membrane Component; ABC Transporter Membrane Protein; ABC Polyamine Transporter Inner Membrane Subunit; ABC TRANSPORTER Membrane Component; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Molybdenum ABC Transporter Permease; Permease Protein

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MHSTRRRTTDDRRARAAQAMSRRAAHLACALPVAARGAVISSSSTPPIILVDENVYIALRTPMTPPSKDAAALARPAAAA
GPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEV
ALATLAVTLVAGVPAGYALARSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVR
AVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPVGLADTYAS
LRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRTCKRR

Sequences:

>Translated_366_residues
MHSTRRRTTDDRRARAAQAMSRRAAHLACALPVAARGAVISSSSTPPIILVDENVYIALRTPMTPPSKDAAALARPAAAA
GPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEV
ALATLAVTLVAGVPAGYALARSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVR
AVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPVGLADTYAS
LRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRTCKRR
>Mature_366_residues
MHSTRRRTTDDRRARAAQAMSRRAAHLACALPVAARGAVISSSSTPPIILVDENVYIALRTPMTPPSKDAAALARPAAAA
GPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEV
ALATLAVTLVAGVPAGYALARSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVR
AVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPVGLADTYAS
LRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRTCKRR

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787368, Length=211, Percent_Identity=29.3838862559242, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38910; Mature: 38910

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSTRRRTTDDRRARAAQAMSRRAAHLACALPVAARGAVISSSSTPPIILVDENVYIALR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCEEEEECCEEEEEE
TPMTPPSKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAM
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALA
HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHH
RSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEEEE
MLHTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRD
EEECCCCCEEECCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RTCKRR
HHCCCC
>Mature Secondary Structure
MHSTRRRTTDDRRARAAQAMSRRAAHLACALPVAARGAVISSSSTPPIILVDENVYIALR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCEEEEECCEEEEEE
TPMTPPSKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAM
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALA
HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHH
RSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEEEE
MLHTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRD
EEECCCCCEEECCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RTCKRR
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA