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The map label for this gene is cc4 [H]

Identifier: 237811634

GI number: 237811634

Start: 1319865

End: 1320533

Strand: Direct

Name: cc4 [H]

Synonym: GBP346_A1371

Alternate gene names: 237811634

Gene position: 1319865-1320533 (Clockwise)

Preceding gene: 237811633

Following gene: 237811635

Centisome position: 32.2

GC content: 72.65

Gene sequence:

>669_bases
TTGCTGAGCCAGACGGCGCTATCCCAGGAACCGCAGACCGAGCGCGCGCCCGACACGATGGAGGCGCGCGTGCTGGCGTG
CGCCGCGTGCCACGGCCGGCAGGGCGAGGGGACGTCGAACGACTACTTTCCGCGCCTGTCCGGCAAGCCCGCCGGCTATC
TGTACAACCAGCTCGTCGCGTTCCGCGACGGCCGGCGCAAGTATCCGCCGATGAACTACCTGCTCGCGTATCTGCCCGAC
GCGTACCTGCGCAAGATCGCCGATCACTTCGCGAGCCGGCGGCCGCCGTTCCCGACGATCGCGGCGCCCGCCGCCGCGCC
GGCGGTGCTCGAGCGGGGCCGGCTGCTCGTCAAGTCGGGCGACCCCTCGCACAAGATTCCCGCGTGCGCGTCGTGCCACG
GCGCGTCGCTGACGGGCATGGAGCCCGCCGTGCCGGGCCTGCTCGGCCTGCATGCCGAATACCTGAGCGCGCAGCTCGGC
GCATGGCGCTACGGCACGCGCACGTCGATCGCGCCGGACTGCATGCAGCAGGTCGCGTCGCGCCTCACCGACACGGACGT
GACCGCCATCTCCGCGTGGCTCGCTTCGCAGCCCGCGCCCGCGAACCCGTCGCCCGCCCCCGCGGGCTCGCTCGACATGC
CGCTCGCATGCGGTAGCGAACCGCGTTAA

Upstream 100 bases:

>100_bases
CCGCAGGGGCGGCTCGCGTCGCTGGCGGGAACTGCACGCCTTCCCGGAGAGGATGACAGTGACCTCGAGACCCACCGCTG
TACTTGCCGTACTGTGCGGC

Downstream 100 bases:

>100_bases
TGGAGGCCTCGGTGCACAAGCATTTGATCGTCAAATTCCGCAGCGCGTGCGCGAATGCCGCGCTCGGGCTGCTCGCGGCG
ACGCTCGCCGCATCCGCCGC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVAFRDGRRKYPPMNYLLAYLPD
AYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLG
AWRYGTRTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR

Sequences:

>Translated_222_residues
MLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVAFRDGRRKYPPMNYLLAYLPD
AYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLG
AWRYGTRTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR
>Mature_222_residues
MLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVAFRDGRRKYPPMNYLLAYLPD
AYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLG
AWRYGTRTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23659; Mature: 23659

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVA
CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FRDGRRKYPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSG
HHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECC
DPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLGAWRYGTRTSIAPDCMQQVAS
CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVA
CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FRDGRRKYPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSG
HHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECC
DPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLGAWRYGTRTSIAPDCMQQVAS
CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]