| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811629
Identifier: 237811629
GI number: 237811629
Start: 1315440
End: 1315790
Strand: Reverse
Name: 237811629
Synonym: GBP346_A1366
Alternate gene names: NA
Gene position: 1315790-1315440 (Counterclockwise)
Preceding gene: 237811641
Following gene: 237811628
Centisome position: 32.1
GC content: 73.22
Gene sequence:
>351_bases GTGGCTTCAGCCCGGCACTGCCGACCTCGGACTGCCCGCCCTTGGCCGCCGGCGCCGAAGCGTTCGCGTCGACGGGATGC CCCCGGCGCGCCGAGTTCCACGCGCGTTTCGATGCGCGTCGAGCACCGTACCCGGCGACGAACGCCGGGCAGCGGCGCAC AATCGCGCAGGACGCAGACGCTCGCCCCCGCCCGGGCGTCGCTCGCCGCTCGTCGCGTCGAACGGCCGCGCGTGCGTCTC GCGCCGCCGCAAGCCTCTCGCAACATTCACGTAGACCGCTCGGTTTTCCGCACACGCGGCCATGCGCCGACGGATTCACA CTCGACGCCATCCGGGCCCGGTCTGCGTTGA
Upstream 100 bases:
>100_bases GGCGCAGCCGGCCATGTGCCGCCGACGGCCGGCTTCGGCGGCGTGCGCTGCGCGCATCCTTTCGCGGCGGCGGCGCTCAA GCCGCCGGCATCGGGATTTC
Downstream 100 bases:
>100_bases TCGACTGGCCGAGCGTTCGCCTGCGCCCACGGCGTCCGCAAATTCCCCTGCACGAAATCGATCGCAGAACAAAATCGAAG CCGGCCATTGACCCCGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MASARHCRPRTARPWPPAPKRSRRRDAPGAPSSTRVSMRVEHRTRRRTPGSGAQSRRTQTLAPARASLAARRVERPRVRL APPQASRNIHVDRSVFRTRGHAPTDSHSTPSGPGLR
Sequences:
>Translated_116_residues MASARHCRPRTARPWPPAPKRSRRRDAPGAPSSTRVSMRVEHRTRRRTPGSGAQSRRTQTLAPARASLAARRVERPRVRL APPQASRNIHVDRSVFRTRGHAPTDSHSTPSGPGLR >Mature_115_residues ASARHCRPRTARPWPPAPKRSRRRDAPGAPSSTRVSMRVEHRTRRRTPGSGAQSRRTQTLAPARASLAARRVERPRVRLA PPQASRNIHVDRSVFRTRGHAPTDSHSTPSGPGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12918; Mature: 12787
Theoretical pI: Translated: 12.96; Mature: 12.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASARHCRPRTARPWPPAPKRSRRRDAPGAPSSTRVSMRVEHRTRRRTPGSGAQSRRTQT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCHHH LAPARASLAARRVERPRVRLAPPQASRNIHVDRSVFRTRGHAPTDSHSTPSGPGLR HCHHHHHHHHHHHCCCCEEECCCCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASARHCRPRTARPWPPAPKRSRRRDAPGAPSSTRVSMRVEHRTRRRTPGSGAQSRRTQT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCHHH LAPARASLAARRVERPRVRLAPPQASRNIHVDRSVFRTRGHAPTDSHSTPSGPGLR HCHHHHHHHHHHHCCCCEEECCCCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA