Click here to switch to the map view.

The map label for this gene is 237811625

Identifier: 237811625

GI number: 237811625

Start: 1313097

End: 1313786

Strand: Direct

Name: 237811625

Synonym: GBP346_A1362

Alternate gene names: NA

Gene position: 1313097-1313786 (Clockwise)

Preceding gene: 237811624

Following gene: 237811626

Centisome position: 32.04

GC content: 69.42

Gene sequence:

>690_bases
GTGTATCGTGCGGCTTTTCGTCCGCACGCTGTCGGTGTTCCATTCGGCGTACGCATGATGCTGCTTGCCGCGGCGTCGCG
CGCGCACGCCCGCATTCCGAACGATGGCACGAAGCCCGCGCGGCGGCGTTTGCGCTTGCCGCGGCTGACAGGCGTTTCAT
CGGCGTCGCGCATTGCGTGTGCATTCGCGTGCACGTTTTCGCCGATTTCTCGAAGAGGGCCGACGATGCAGTTCGAAGAG
TTGAGCGATGACGAATGGGCGCGTATCGAGGGGTTGCTGGCCGTCCAGCCGGTGCGCAATACGCGTTGCGGCCGGCCGCG
CGCGCAGGCGCGCGCGGTCGCGAATGCGGTGCTGTGGGTGCTGACGACCGGCGAGTGCTGGGCCGCGTTGCCGCGCCGCT
ATCCGTCGTCGCCGACTTGCCGCCGCCGTTTCGACGAATGGTCCGCCGACGGCACGCTGGCCGCGCTCATCGAGCGGTTG
CGAGGCGCCGGGCGGCAGGTCGAGCTGCGCGAGCGGATCGGCGCGATCGACGCGAAGCCGCATGCGCGGGCGCGTCGCCG
GTTTCAGCATAACGCGTTCTGGAGCAGCCCTGAATCCTGGTGCGCGCCCGCCGTCGCCGTCGTCGGCGGCGTGATCGAGG
CAGGCAGGGACGACTGCGTGCCCGAGCATGGCGAGGGCAACGCGAATTGA

Upstream 100 bases:

>100_bases
CGAATCGCCTTGCCGCCATGCGAGGCCCGATCGGCGGAATCGAATCGAGATCCTGAGATTTACTTAGAACGACAATGTAT
TTATCCGGGGAAGGGGGTTC

Downstream 100 bases:

>100_bases
CGGCCGGCCATGCGCGTCGCGCTTCGGCGGGCGGGCCTGCTCATCCGCCGTCGCGGCGCTGCCGTGATCCGCTGCCCGAA
GGCGATCGCCCGGCTTGGGT

Product: putative transposase

Products: NA

Alternate protein names: Transposase Protein; Transposase; IS5 Family Transposase OrfA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MYRAAFRPHAVGVPFGVRMMLLAAASRAHARIPNDGTKPARRRLRLPRLTGVSSASRIACAFACTFSPISRRGPTMQFEE
LSDDEWARIEGLLAVQPVRNTRCGRPRAQARAVANAVLWVLTTGECWAALPRRYPSSPTCRRRFDEWSADGTLAALIERL
RGAGRQVELRERIGAIDAKPHARARRRFQHNAFWSSPESWCAPAVAVVGGVIEAGRDDCVPEHGEGNAN

Sequences:

>Translated_229_residues
MYRAAFRPHAVGVPFGVRMMLLAAASRAHARIPNDGTKPARRRLRLPRLTGVSSASRIACAFACTFSPISRRGPTMQFEE
LSDDEWARIEGLLAVQPVRNTRCGRPRAQARAVANAVLWVLTTGECWAALPRRYPSSPTCRRRFDEWSADGTLAALIERL
RGAGRQVELRERIGAIDAKPHARARRRFQHNAFWSSPESWCAPAVAVVGGVIEAGRDDCVPEHGEGNAN
>Mature_229_residues
MYRAAFRPHAVGVPFGVRMMLLAAASRAHARIPNDGTKPARRRLRLPRLTGVSSASRIACAFACTFSPISRRGPTMQFEE
LSDDEWARIEGLLAVQPVRNTRCGRPRAQARAVANAVLWVLTTGECWAALPRRYPSSPTCRRRFDEWSADGTLAALIERL
RGAGRQVELRERIGAIDAKPHARARRRFQHNAFWSSPESWCAPAVAVVGGVIEAGRDDCVPEHGEGNAN

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25277; Mature: 25277

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRAAFRPHAVGVPFGVRMMLLAAASRAHARIPNDGTKPARRRLRLPRLTGVSSASRIAC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
AFACTFSPISRRGPTMQFEELSDDEWARIEGLLAVQPVRNTRCGRPRAQARAVANAVLWV
HHHHHCCHHHCCCCCCCHHHCCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHEE
LTTGECWAALPRRYPSSPTCRRRFDEWSADGTLAALIERLRGAGRQVELRERIGAIDAKP
EECCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHCCCCCCC
HARARRRFQHNAFWSSPESWCAPAVAVVGGVIEAGRDDCVPEHGEGNAN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYRAAFRPHAVGVPFGVRMMLLAAASRAHARIPNDGTKPARRRLRLPRLTGVSSASRIAC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
AFACTFSPISRRGPTMQFEELSDDEWARIEGLLAVQPVRNTRCGRPRAQARAVANAVLWV
HHHHHCCHHHCCCCCCCHHHCCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHEE
LTTGECWAALPRRYPSSPTCRRRFDEWSADGTLAALIERLRGAGRQVELRERIGAIDAKP
EECCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHCCCCCCC
HARARRRFQHNAFWSSPESWCAPAVAVVGGVIEAGRDDCVPEHGEGNAN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA