Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237811612

Identifier: 237811612

GI number: 237811612

Start: 1293397

End: 1294029

Strand: Reverse

Name: 237811612

Synonym: GBP346_A1344

Alternate gene names: NA

Gene position: 1294029-1293397 (Counterclockwise)

Preceding gene: 237811615

Following gene: 237811611

Centisome position: 31.57

GC content: 74.25

Gene sequence:

>633_bases
GTGGTGCTCGATTCGAACGTCTGGATCGATATCCTCGTGTTCGACGACCCCGCCGCCCGCCCGATCCGCGATGCCCTCGA
GACGGGCGCCATCACGGCGCTCATCGACGTCCGCTGCCTGATCGAGCTCGAACGCGTGCTCGACTACCCGCAGTTCAAGG
CGCGCGCGGTCGACAAGGCCGCCGCGCTCGCCACGGTCGCGCGCCTGTCGGAGCGCGTCGCGGGGCCCGAACGCCGTGAC
GCGCGCGCGCACGCCGCGACGGCGGCGGGCGCGCACGCATCGCCCGCCCTCGCCGCGTCGCCCGCGCACATCGCCGATAG
CGGAAATGCGCGAAGCGGCGCGTGCGGCACGCCTGCGCCGCACGCGCGAGCGTGCCCACCGCCTTGCGCCGACGCGGCCG
CGCGCGCTCCCGCCGACGACGCACCGCCGCGCCCGCTGCCGAAATGCCGGGACCGCGACGATCAGAAATTCCTCGAGCTC
GCTTATACGGCGCGCGCCGACTGGCTCGTCTCGAAGGATCGCGCGCTGTTGAAGCTCACCCGCCGCACCGAGCGCGACTT
CGGCTTCCGGATCGCGCAGCCCGCGCCGTTCGCCGCGAGCGCGCTCGCGGCCGACGCATCCGAGCCGGCGTAA

Upstream 100 bases:

>100_bases
TTATCATAGAGGCTCGCCGGCACGCCGTGCCGCGCAATCAGACGAAAACCACCGATTGTAACGAATGCCCAGCTCCGACG
CTCCCCGCGCCGGTCGCCGC

Downstream 100 bases:

>100_bases
GCGACGCACTCGCCCGAGCCGCCCCCACCCCTTTTCGCGCAAGCCATGATGAACGCACCGCACGACATGCCGACGACGCC
CACTCTCCTCTCGCGCCTGC

Product: nucleotide binding protein PINc

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARLSERVAGPERRD
ARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLEL
AYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA

Sequences:

>Translated_210_residues
MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARLSERVAGPERRD
ARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLEL
AYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
>Mature_210_residues
MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARLSERVAGPERRD
ARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLEL
AYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22244; Mature: 22244

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKA
CEECCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AALATVARLSERVAGPERRDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
HARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADWLVSKDRALLKLT
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
RRTERDFGFRIAQPAPFAASALAADASEPA
HHHHHCCCEEECCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKA
CEECCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AALATVARLSERVAGPERRDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
HARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADWLVSKDRALLKLT
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
RRTERDFGFRIAQPAPFAASALAADASEPA
HHHHHCCCEEECCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA