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The map label for this gene is 237811509

Identifier: 237811509

GI number: 237811509

Start: 1198706

End: 1199599

Strand: Reverse

Name: 237811509

Synonym: GBP346_A1239

Alternate gene names: NA

Gene position: 1199599-1198706 (Counterclockwise)

Preceding gene: 237811510

Following gene: 237811508

Centisome position: 29.27

GC content: 70.02

Gene sequence:

>894_bases
ATGACCGAAACCTCCCGTCCGGCGCCGTCCGACGAACCGTTCGCCGCGCTGCGTCCGCGCCTTTTCTCGATCGCGTACCG
AATGCTCGGCACGCGCGCCGATGCCGAAGACGTGCTGCAGGACGCCTGGCTGCGCTGGCACCAGGCCGAACGCGACACGC
TCGATTCGCCCGAGGCATGGCTCGTCACGGTCGTCACCCGGCTGTCGATCGATCGGCTGCGCGCCGCGAAGGCGCAGCGC
GACGCCTATGTCGGATGGTGGCTCCCCGAGCCGCTCGTCGACATCGATGAGCGCACGCCCGAGGCCGCGGCCGAGTTCGC
CGACGACCTGTCGGTGGCGCTACTGTGGGTGCTCGAACGGCTCTCGCCCGAGGAACGCGCGGCATTCCTGCTGCGCCAGG
CGTTCGAGCGCGACTACGCGGAAATCGCGCAACTGCTCGACAAGAGCGAAGCGGCCTGCCGCCAGCTCGTCCACCGCGCG
TCGACGCGCGTGCAGCAGGAACACCGGCGCTTCGACGTATCGCGCGAGCGCCACCGGCAACTCGTCGAGCGCTTCGCGCG
CGCCGCGGCAAGCGGCGAGCGCAACGCGATCCGGGCGCTGCTCGCCGACGACGTGGAACTGGTCGGCGACGGCGGCGGCA
AGGTGCCGTCGTTCTTCAAGGTGCTGCGCGGCGCGCTCCGGATCGCGAATCTGTATTGGGCCGTCGGCCGACGCCATGCC
GGGCAGATCGAATACCGGCTCGCGCAAATCAACGGCGAACCGGGCCTGCTGCGCTTCATCGACGGGCGGATCGAATCGGC
ACAGGCGTGCGTCACCGACGGCGCGCGAATCGTCGCGATCTACGCGGTGCGCAATCCGGACAAGCTCGCGCATATTCCGA
GCCGCCCGGCGTGA

Upstream 100 bases:

>100_bases
CCCCGCCGCGCCCGCGGCTGTCACAAATGCGTCGTCTGCTTCGTCTTGATCATTCGAACCGTTGGTTTTTCAAGCCGCCT
TTCAAGCCCATCCCAAGAAC

Downstream 100 bases:

>100_bases
CCCGCGGCGCGCGCAGGCCGACGCGTCCGGCGCGCCCGGCACGCGCGAAGCGCCGCGTCCCGCCCGCGCGCCGCCCGCCG
CGGCCCCGCCGCATCGCGCG

Product: RNA polymerase sigma-70 factor, TIGR02947 family

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Sigma Factor; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; Sigma Factor Protein; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTETSRPAPSDEPFAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQAERDTLDSPEAWLVTVVTRLSIDRLRAAKAQR
DAYVGWWLPEPLVDIDERTPEAAAEFADDLSVALLWVLERLSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRA
STRVQQEHRRFDVSRERHRQLVERFARAAASGERNAIRALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWAVGRRHA
GQIEYRLAQINGEPGLLRFIDGRIESAQACVTDGARIVAIYAVRNPDKLAHIPSRPA

Sequences:

>Translated_297_residues
MTETSRPAPSDEPFAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQAERDTLDSPEAWLVTVVTRLSIDRLRAAKAQR
DAYVGWWLPEPLVDIDERTPEAAAEFADDLSVALLWVLERLSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRA
STRVQQEHRRFDVSRERHRQLVERFARAAASGERNAIRALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWAVGRRHA
GQIEYRLAQINGEPGLLRFIDGRIESAQACVTDGARIVAIYAVRNPDKLAHIPSRPA
>Mature_296_residues
TETSRPAPSDEPFAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQAERDTLDSPEAWLVTVVTRLSIDRLRAAKAQRD
AYVGWWLPEPLVDIDERTPEAAAEFADDLSVALLWVLERLSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRAS
TRVQQEHRRFDVSRERHRQLVERFARAAASGERNAIRALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWAVGRRHAG
QIEYRLAQINGEPGLLRFIDGRIESAQACVTDGARIVAIYAVRNPDKLAHIPSRPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33581; Mature: 33450

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETSRPAPSDEPFAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQAERDTLDSPEAW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
LVTVVTRLSIDRLRAAKAQRDAYVGWWLPEPLVDIDERTPEAAAEFADDLSVALLWVLER
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRERHRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVERFARAAASGERNAIRALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWAVGRRHA
HHHHHHHHHCCCCHHHHHHHHHHCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GQIEYRLAQINGEPGLLRFIDGRIESAQACVTDGARIVAIYAVRNPDKLAHIPSRPA
CCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCCCCCC
>Mature Secondary Structure 
TETSRPAPSDEPFAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQAERDTLDSPEAW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
LVTVVTRLSIDRLRAAKAQRDAYVGWWLPEPLVDIDERTPEAAAEFADDLSVALLWVLER
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRERHRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVERFARAAASGERNAIRALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWAVGRRHA
HHHHHHHHHCCCCHHHHHHHHHHCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GQIEYRLAQINGEPGLLRFIDGRIESAQACVTDGARIVAIYAVRNPDKLAHIPSRPA
CCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA