| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is gluQ [H]
Identifier: 237811492
GI number: 237811492
Start: 1177565
End: 1178458
Strand: Reverse
Name: gluQ [H]
Synonym: GBP346_A1222
Alternate gene names: 237811492
Gene position: 1178458-1177565 (Counterclockwise)
Preceding gene: 237811493
Following gene: 237811491
Centisome position: 28.75
GC content: 74.16
Gene sequence:
>894_bases ATGACACGCTATCGCGGGCGCTTCGCGCCGTCGCCCACCGGCCCCCTGCACTTCGGCTCGCTCGTCGGCGCGCTCGCGAG CTGGCTCGACGCGCGCGCGTGGGGCGGCGCGTGGCTCGTGCGAATCGAGGATATCGACGGCCCGCGCACGGTGCCCGGCG CGGCCGAAGACATGCTCGCGACGCTGCGCGGCTTCGGCTTCATCGCCGACGAGCCGCCCGTCTGGCAAAGCGCGCGCGTC GCGCACTACGAAGCGGCGCTCGCGCGGCTCACCGCCGCGGGGCTCGTCTATCCGTGCGGCTGCTCGCGCAAGGAGATCGC CGATTCGCTGCGCGCCGCGCACGAGCGGCACACGACGCTCGCGTATCCCGGCACGTGCCGCACGGGCCTGCACGGCAAGC CCGCGCGCGCATGGCGCTTGCGCGTGCCGGACGGCGCCGCGGCCGTCGTCGCGTTCGACGACCGCTGGCAGCGCGCGCAA ACGCAGAATCTCGCGACCGAAGTCGGCGATTTCGTGCTGAAGCGCGCGGACGGACAATGGGCGTATCAACTCGCCGTCGT CGTCGACGACGGCGATGCGAACATCACGCACGTCGTGCGCGGCGCCGATCTGCTCGACTCGACCGCTCGCCAGATCTACC TGCAGCGCTGCCTCGGGCTGCCGACGCCGCGCTATCTGCACGTGCCTGTCGTCCTCGACGCGAACGGCGAGAAGCTCAGC AAGCAAACGGGCGCGGCGGCGCTCGATCCCGCCGCGCCGCTGCCGGCGCTCGCCGCCGCCGCGCGGCACCTGGGGCTCGC GCTCGACGGCGCGGCGTGCGCGTCGCTCGACGCGTTCCAGGCGGCCGCGATCGCCGCGTGGGACACGCGCTTCGGGCCGA ACGCGCGCGGCTGA
Upstream 100 bases:
>100_bases TCCGGCACGCCGGGCCGGCGCGCGGAGCCGGGCGCCGAACCGGCGCGCGCCGTGTGAGCCCGCGCCGCCCATTGCTCCGC GTCGCCGCGCGCCGCATCGA
Downstream 100 bases:
>100_bases AGACACCAGCCGGATGATGCGGCATGGTCGCTTCGACCGGCGTTGCGACCGTCGCGCCGCTACGCCGGCGCACCGTCGGC GATCGCCGAGCCGGCGATTC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQ TQNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDTRFGPNARG
Sequences:
>Translated_297_residues MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQ TQNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDTRFGPNARG >Mature_296_residues TRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARVA HYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQT QNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLSK QTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDTRFGPNARG
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=264, Percent_Identity=37.1212121212121, Blast_Score=150, Evalue=1e-36, Organism=Escherichia coli, GI226510925, Length=264, Percent_Identity=45.8333333333333, Blast_Score=203, Evalue=1e-53, Organism=Escherichia coli, GI1788743, Length=247, Percent_Identity=35.6275303643725, Blast_Score=158, Evalue=5e-40, Organism=Caenorhabditis elegans, GI71993394, Length=290, Percent_Identity=31.0344827586207, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324540, Length=259, Percent_Identity=33.2046332046332, Blast_Score=134, Evalue=3e-32, Organism=Drosophila melanogaster, GI24665321, Length=260, Percent_Identity=34.6153846153846, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 31630; Mature: 31499
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHH TLRGFGFIADEPPVWQSARVAHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTL HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCEE AYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQTQNLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHH KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDTRFGPNARG HHCCCCCCCCCCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHEECCCCCCCCCCC >Mature Secondary Structure TRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHH TLRGFGFIADEPPVWQSARVAHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTL HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCEE AYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQTQNLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHH KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDTRFGPNARG HHCCCCCCCCCCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA