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The map label for this gene is fliR [H]

Identifier: 229918644

GI number: 229918644

Start: 2889576

End: 2890346

Strand: Direct

Name: fliR [H]

Synonym: EAT1b_2931

Alternate gene names: 229918644

Gene position: 2889576-2890346 (Clockwise)

Preceding gene: 229918643

Following gene: 229918645

Centisome position: 96.32

GC content: 45.01

Gene sequence:

>771_bases
ATGAATGTGGTCGACTTCATCAGTATGTATGGGTTAACGTTCGCACGACTGTCTGGCTTTTTTGTGAGTGTCCCGTTGTT
CTCGACGAGACAATTACCGGTCATGCACCGCGTCGGGTTCAGTGCGTTTTTAGCGTATTACGCGATGTTTACACTGACCG
AGCCAATCCAGATGACGAATGCGTTCGTCCTGCAAGTCGTCTATGAAGTCATGATCGGACTTTTACTTGGACTGTTAATC
AACATTCTATTTTTTGCACCACAAATTGCCGGTGGGGTCATTGATTTACAGCTCGGATTAGCGATGGCTTCTGCATACGA
TCCGATGTTTGGCGGTCAATCACCATTGATTGGACGATTTTATTATATTTTTACGCTTTTCATTTTGTTGACGAGCAACC
TGCATCTTCTGCTGATTGATGGCATTTATTATAGCTTTCAAATCTATCCGCCTGGTCAACCGATGATCAACTTTACCGAA
GCCTCATTGATGATGGCCGTGAAAGTCGTCACCATGACCATGATGGTCGCGTTGCAATTGGCGTTGCCGATGATGGCTTC
CTTGCTACTTGTTGACTTAGCTCTCGGATTTTTAGCGAAGTCAGCGCCACAGTTCAATATCTTTGCCATCGGATTTTCAT
TTAAACTCATCGCCGGCTTTGCCGTCATGGTTTTATTGATGGGACTGACATTGACAGGGATCAGCCAGTTCATCCCGCTA
TTACAAGAAGTGATGCACGACTTTATGCTTATATTAGGAGACGCCTCATGA

Upstream 100 bases:

>100_bases
CGGTCTTCATCGGTCTCGTCATCTTTGGACCGTGGATGCTTCAACAGATTGAAGGATTCACGCGTTTGATCTTTGAGTTG
ATGGTCGAGGTTGCATCGAA

Downstream 100 bases:

>100_bases
ATAAGCCTCTATATCCTTTATCGGTCAATCTACAGTTTTTTGCAGGCGAAAAGACAGAAAAAGCGACTCCACGTAAACGG
GAAGACTCCCGAAAGAAGGG

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNVVDFISMYGLTFARLSGFFVSVPLFSTRQLPVMHRVGFSAFLAYYAMFTLTEPIQMTNAFVLQVVYEVMIGLLLGLLI
NILFFAPQIAGGVIDLQLGLAMASAYDPMFGGQSPLIGRFYYIFTLFILLTSNLHLLLIDGIYYSFQIYPPGQPMINFTE
ASLMMAVKVVTMTMMVALQLALPMMASLLLVDLALGFLAKSAPQFNIFAIGFSFKLIAGFAVMVLLMGLTLTGISQFIPL
LQEVMHDFMLILGDAS

Sequences:

>Translated_256_residues
MNVVDFISMYGLTFARLSGFFVSVPLFSTRQLPVMHRVGFSAFLAYYAMFTLTEPIQMTNAFVLQVVYEVMIGLLLGLLI
NILFFAPQIAGGVIDLQLGLAMASAYDPMFGGQSPLIGRFYYIFTLFILLTSNLHLLLIDGIYYSFQIYPPGQPMINFTE
ASLMMAVKVVTMTMMVALQLALPMMASLLLVDLALGFLAKSAPQFNIFAIGFSFKLIAGFAVMVLLMGLTLTGISQFIPL
LQEVMHDFMLILGDAS
>Mature_256_residues
MNVVDFISMYGLTFARLSGFFVSVPLFSTRQLPVMHRVGFSAFLAYYAMFTLTEPIQMTNAFVLQVVYEVMIGLLLGLLI
NILFFAPQIAGGVIDLQLGLAMASAYDPMFGGQSPLIGRFYYIFTLFILLTSNLHLLLIDGIYYSFQIYPPGQPMINFTE
ASLMMAVKVVTMTMMVALQLALPMMASLLLVDLALGFLAKSAPQFNIFAIGFSFKLIAGFAVMVLLMGLTLTGISQFIPL
LQEVMHDFMLILGDAS

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28264; Mature: 28264

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVDFISMYGLTFARLSGFFVSVPLFSTRQLPVMHRVGFSAFLAYYAMFTLTEPIQMTN
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AFVLQVVYEVMIGLLLGLLINILFFAPQIAGGVIDLQLGLAMASAYDPMFGGQSPLIGRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
YYIFTLFILLTSNLHLLLIDGIYYSFQIYPPGQPMINFTEASLMMAVKVVTMTMMVALQL
HHHHHHHHHHHCCCCEEEEECEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
ALPMMASLLLVDLALGFLAKSAPQFNIFAIGFSFKLIAGFAVMVLLMGLTLTGISQFIPL
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEVMHDFMLILGDAS
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVVDFISMYGLTFARLSGFFVSVPLFSTRQLPVMHRVGFSAFLAYYAMFTLTEPIQMTN
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AFVLQVVYEVMIGLLLGLLINILFFAPQIAGGVIDLQLGLAMASAYDPMFGGQSPLIGRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
YYIFTLFILLTSNLHLLLIDGIYYSFQIYPPGQPMINFTEASLMMAVKVVTMTMMVALQL
HHHHHHHHHHHCCCCEEEEECEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
ALPMMASLLLVDLALGFLAKSAPQFNIFAIGFSFKLIAGFAVMVLLMGLTLTGISQFIPL
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEVMHDFMLILGDAS
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]