| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918629
Identifier: 229918629
GI number: 229918629
Start: 2879503
End: 2880228
Strand: Direct
Name: 229918629
Synonym: EAT1b_2916
Alternate gene names: NA
Gene position: 2879503-2880228 (Clockwise)
Preceding gene: 229918628
Following gene: 229918630
Centisome position: 95.99
GC content: 46.56
Gene sequence:
>726_bases ATGACATCGTTGTCTAATGTAATTAAACGCCAACGTGCAACATCGAATACCCCGCAACGAATCGAATCGAAGCGATTAGA GACACCCGTAATAGAACCGAATGACGGAATCAATCATGGGGATGCCATCCAATCACGCTATGAGAAGTTGAAGCAGGACG AAGAAGCGTTTCAACAGTTTCAACAGACTGAAGTCGAACAGTTGGAGCGGTTGAAGCAACAAGTGTTTGAAGAAGCGCGT TCAGAAGGATACCAAGAAGGACTCCTTCAAGGTAGGCAGGATGGATTGGCTGAATTTGAAGAGATCACGACACGTTTGAA TTCCGTTTCGACCGAACTCGAACTCTTATTCGAAGAAAAGTGGAGGCGAGCGGAAGAACAACTCATTGAATTGGCCGTTA CAGTCAGTGCACACGTGACGACAGATCTTGTCCGAAAAGATGAAGAGCTATTTGCGACCATGATTCGTGATCAGATGTCA CATATGATCGATGCCGAAGCACTTACAATCTTTGTTCATCCGACACGTCTTGCCTCCATTCAGCGATTCGAATCGATGTG GCGGACAGAAGAGACACCTCCTCTGAAATATCGAGGGGACGGATCATTGGATGAGACAGCAGTTCGAATCGAGTCGCCAC ATCGTGGCAATGAAGTCGATTTGACATATAGTTTCGAACGGATCCAAGCCAAAATCGAGGAGGTTCTAGCGGATGGCGCT TATTGA
Upstream 100 bases:
>100_bases GTACGGTTGCGTGACGTCGAAGAGGCACAGAGCCGAATCGTCGGAATCATTCGTCGCCTAGAGGACGTCGGTGAGATTGT AATCAGTCGAGGTGGAGGAG
Downstream 100 bases:
>100_bases GCAGGTTCTCGGCTCAATCAAACAGTCTACAGACGGCGAGTTCACGCGAAAAATCGGTCGAGTTTGTCGAGTCATCGGCT TGATGATTGAGTCGAACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQFQQTEVEQLERLKQQVFEEAR SEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEKWRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMS HMIDAEALTIFVHPTRLASIQRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA Y
Sequences:
>Translated_241_residues MTSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQFQQTEVEQLERLKQQVFEEAR SEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEKWRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMS HMIDAEALTIFVHPTRLASIQRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA Y >Mature_240_residues TSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQFQQTEVEQLERLKQQVFEEARS EGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEKWRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMSH MIDAEALTIFVHPTRLASIQRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGAY
Specific function: Unknown
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27917; Mature: 27786
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQTEVEQLERLKQQVFEEARSEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMSHMIDAEALTIFVHPTRLASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH QRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA HHHHHHHCCCCCCCCEECCCCCCCHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCC Y C >Mature Secondary Structure TSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQF CHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQTEVEQLERLKQQVFEEARSEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMSHMIDAEALTIFVHPTRLASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH QRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA HHHHHHHCCCCCCCCEECCCCCCCHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA