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The map label for this gene is rbgA [H]

Identifier: 229918611

GI number: 229918611

Start: 2862436

End: 2863296

Strand: Direct

Name: rbgA [H]

Synonym: EAT1b_2898

Alternate gene names: 229918611

Gene position: 2862436-2863296 (Clockwise)

Preceding gene: 229918610

Following gene: 229918612

Centisome position: 95.42

GC content: 51.68

Gene sequence:

>861_bases
TTGGCAATTCAATGGTTTCCTGGCCACATGGCCAAAGCAAGAAGACAAGTAACTGAAAAATTAAAGCTGATCGATGTCGT
CATCGAACTCGTGGATGCCCGCGTGCCTCAATCGAGTCGTAACCCGATGGTCGATGAGATTACAGCAGGAAAACCTCGTC
TCATCGTCTTGAACAAAGCAGACATGGCCGATCCCGTCGTGACGGATGCGTGGTTACGCGCCTTGAAACGCGAAGAGGTC
GAGGTTGTCGCAGTCGACGCGAAGCATAGCAAAGGCTTAAAACAGCTCATCACGGGTGCTCAGAAGTTGATGAAAGAAAA
GCATGACCGGATGCGTGAGAAGGGGCGTAACCCCGGACCGATCCGTGCGCTCATCATCGGAATCCCGAACGTCGGGAAGT
CGACGCTCATCAACCGTCTCGCTGGACGAAACATTGCTATCACGGGCGACCGTCCTGGTGTGACGAAGCGTCAACAGTGG
ATCAAGATGAAAGGCGGCGAGATGGAACTGTTGGACACGCCGGGGATTCTCTGGCCGAAGTTCGAGGATCAACTTGTCGG
ATATCGTCTAGCCGCGACCGGCGCCATCAAAGACGAGATTCTCAACTTGGATGATATCGCCTTGTATACGGTTCGCGAGT
TGCATGCTCGTTATCCGGAACAATTAAAGGAACGATTTAAACTTGAAACGTTACCCGAGGACGGCGTGGAGCTCCTTGAG
TTGATCGGGAAAAAGCGTGGTCTCATCAGTGGTGGTTACGTCGATTTCGAAAAGGCGAGCGAACTACTTTTAAATGAACT
ACGACATGAAAAAATCGGACGGATCTCCCTTGAGACACCGGCTGATCACGAAATGGCGTAA

Upstream 100 bases:

>100_bases
GATCGGATTTGTGTCGAAAGAGGAGATTGTCGGCAAGACGAACTTCATCTTCTGGCCACTCGATGATGTTGGCACGGTAG
AAGATTAAGGTGGTGCTTTT

Downstream 100 bases:

>100_bases
AGCCCTGTGCACACAGGGCTTTTTTGAATAGGAGGAAGACCGTGACGATTCAACAGATTAAACAACAACTTCAACAAATC
CGATATGAAGAGTGGAACCA

Product: GTP-binding protein HSR1-related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MAIQWFPGHMAKARRQVTEKLKLIDVVIELVDARVPQSSRNPMVDEITAGKPRLIVLNKADMADPVVTDAWLRALKREEV
EVVAVDAKHSKGLKQLITGAQKLMKEKHDRMREKGRNPGPIRALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQW
IKMKGGEMELLDTPGILWPKFEDQLVGYRLAATGAIKDEILNLDDIALYTVRELHARYPEQLKERFKLETLPEDGVELLE
LIGKKRGLISGGYVDFEKASELLLNELRHEKIGRISLETPADHEMA

Sequences:

>Translated_286_residues
MAIQWFPGHMAKARRQVTEKLKLIDVVIELVDARVPQSSRNPMVDEITAGKPRLIVLNKADMADPVVTDAWLRALKREEV
EVVAVDAKHSKGLKQLITGAQKLMKEKHDRMREKGRNPGPIRALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQW
IKMKGGEMELLDTPGILWPKFEDQLVGYRLAATGAIKDEILNLDDIALYTVRELHARYPEQLKERFKLETLPEDGVELLE
LIGKKRGLISGGYVDFEKASELLLNELRHEKIGRISLETPADHEMA
>Mature_285_residues
AIQWFPGHMAKARRQVTEKLKLIDVVIELVDARVPQSSRNPMVDEITAGKPRLIVLNKADMADPVVTDAWLRALKREEVE
VVAVDAKHSKGLKQLITGAQKLMKEKHDRMREKGRNPGPIRALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWI
KMKGGEMELLDTPGILWPKFEDQLVGYRLAATGAIKDEILNLDDIALYTVRELHARYPEQLKERFKLETLPEDGVELLEL
IGKKRGLISGGYVDFEKASELLLNELRHEKIGRISLETPADHEMA

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=227, Percent_Identity=36.1233480176211, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI7019419, Length=258, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI296317324, Length=176, Percent_Identity=32.3863636363636, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI9506611, Length=176, Percent_Identity=32.3863636363636, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=219, Percent_Identity=30.1369863013699, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25143545, Length=277, Percent_Identity=25.2707581227437, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115535155, Length=275, Percent_Identity=25.0909090909091, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982363, Length=183, Percent_Identity=27.3224043715847, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17534827, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32563985, Length=247, Percent_Identity=28.3400809716599, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71990926, Length=247, Percent_Identity=28.3400809716599, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32563983, Length=247, Percent_Identity=28.3400809716599, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324381, Length=285, Percent_Identity=29.1228070175439, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320842, Length=173, Percent_Identity=30.635838150289, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323744, Length=229, Percent_Identity=29.6943231441048, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI85815858, Length=307, Percent_Identity=29.6416938110749, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI28572990, Length=196, Percent_Identity=32.6530612244898, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI19922460, Length=256, Percent_Identity=28.125, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32192; Mature: 32061

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQWFPGHMAKARRQVTEKLKLIDVVIELVDARVPQSSRNPMVDEITAGKPRLIVLNKA
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECC
DMADPVVTDAWLRALKREEVEVVAVDAKHSKGLKQLITGAQKLMKEKHDRMREKGRNPGP
CCCCHHHHHHHHHHHHHCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IRALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWIKMKGGEMELLDTPGILWPK
EEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
FEDQLVGYRLAATGAIKDEILNLDDIALYTVRELHARYPEQLKERFKLETLPEDGVELLE
HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHH
LIGKKRGLISGGYVDFEKASELLLNELRHEKIGRISLETPADHEMA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCC
>Mature Secondary Structure 
AIQWFPGHMAKARRQVTEKLKLIDVVIELVDARVPQSSRNPMVDEITAGKPRLIVLNKA
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECC
DMADPVVTDAWLRALKREEVEVVAVDAKHSKGLKQLITGAQKLMKEKHDRMREKGRNPGP
CCCCHHHHHHHHHHHHHCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IRALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWIKMKGGEMELLDTPGILWPK
EEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
FEDQLVGYRLAATGAIKDEILNLDDIALYTVRELHARYPEQLKERFKLETLPEDGVELLE
HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHH
LIGKKRGLISGGYVDFEKASELLLNELRHEKIGRISLETPADHEMA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]