| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yloU [H]
Identifier: 229918590
GI number: 229918590
Start: 2842838
End: 2843200
Strand: Direct
Name: yloU [H]
Synonym: EAT1b_2877
Alternate gene names: 229918590
Gene position: 2842838-2843200 (Clockwise)
Preceding gene: 229918588
Following gene: 229918591
Centisome position: 94.76
GC content: 46.01
Gene sequence:
>363_bases ATGGCAATTGAAATGAAGACAACATATGGCAATATTGACATCACAAGTGACGTCATCGCGACACTCGCAGGTGGTGCGGC GATGGAATGCTTCGGTGTGGTCGGCATGGCTTCACAGGCACAATTGAAAGACGGCATTGCTGAATTGTTAAAACGTGAAA ATTACGCGCGTGGTGTCGTCGTACGTCAAGAGGATGAGGACGTACATATCGACATGCACATCATTGTAAGCTACGGGACG AAAGTATCTGAAGTCGCATACAACGTGCAAAGCCGAGTGAAATATACGCTCGGAGAAACTTTAGGATTAAACGTTTCGTC GGTAAATATATTCGTTCAAGGCGTTCGTCTGACGAATGACTGA
Upstream 100 bases:
>100_bases CGTTAATTGACCGAGATTCTGGAGCAGGTTCTTTTAATAACTAGGTACTTATTGTAGAATGTACATTAGGAATCATTCCG AATAAAGGAGGCTACTCCAT
Downstream 100 bases:
>100_bases CGAAAACGGAGGAGGATTTGGTGTGGGTTTAAATCGTTTAGATGGCGTGGCGCTCTCAAACATGATCGCGAACGGAGCGG CCAACTTGAGCCAAAACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAIEMKTTYGNIDITSDVIATLAGGAAMECFGVVGMASQAQLKDGIAELLKRENYARGVVVRQEDEDVHIDMHIIVSYGT KVSEVAYNVQSRVKYTLGETLGLNVSSVNIFVQGVRLTND
Sequences:
>Translated_120_residues MAIEMKTTYGNIDITSDVIATLAGGAAMECFGVVGMASQAQLKDGIAELLKRENYARGVVVRQEDEDVHIDMHIIVSYGT KVSEVAYNVQSRVKYTLGETLGLNVSSVNIFVQGVRLTND >Mature_119_residues AIEMKTTYGNIDITSDVIATLAGGAAMECFGVVGMASQAQLKDGIAELLKRENYARGVVVRQEDEDVHIDMHIIVSYGTK VSEVAYNVQSRVKYTLGETLGLNVSSVNIFVQGVRLTND
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 13014; Mature: 12883
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEMKTTYGNIDITSDVIATLAGGAAMECFGVVGMASQAQLKDGIAELLKRENYARGVV CEEEEEECCCCEEEHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEE VRQEDEDVHIDMHIIVSYGTKVSEVAYNVQSRVKYTLGETLGLNVSSVNIFVQGVRLTND EEECCCCEEEEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEEEEEECC >Mature Secondary Structure AIEMKTTYGNIDITSDVIATLAGGAAMECFGVVGMASQAQLKDGIAELLKRENYARGVV EEEEEECCCCEEEHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEE VRQEDEDVHIDMHIIVSYGTKVSEVAYNVQSRVKYTLGETLGLNVSSVNIFVQGVRLTND EEECCCCEEEEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]