| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ylbN [H]
Identifier: 229918539
GI number: 229918539
Start: 2789611
End: 2790138
Strand: Direct
Name: ylbN [H]
Synonym: EAT1b_2826
Alternate gene names: 229918539
Gene position: 2789611-2790138 (Clockwise)
Preceding gene: 229918537
Following gene: 229918540
Centisome position: 92.99
GC content: 46.59
Gene sequence:
>528_bases ATGAAATGGTCTATTGCACAGCTACTTAAGCTCCGAAACCAGGGTGACGGTTTTACAATCGATGAGATGGTAGAACTACC AGAGCTGACTCAGCTCCATCCGGATATCCGTTCGATTCGCCCGGTGCATGTGCACGGGGATGCATCGTTCACATCTAATC AAGTTACATTCAATCTGAAGATTCAAGGTGACCTGACGTTGCCAGATGCGCGAACGTTAGAAGATGTCACTTATGAATTC GATATTGAATCGCTCGAGCCTTTCTTTTTGGAGAATGGGCGTTATACGGAGCAATTCGATGACGTGAATTTGCCAGAAGG AAATACGATCAGTCTTGTACCGATTGTAAAAGAGCTCATCATGTTAGACGTCCCGATGCAAGTTTACGGGAACGAAACAG ACAAAACTCAGGTTGAAGGAGAAGGCTGGACGCTTACTGACGAACAGCCCGAAGCCCAACCAAAAATTGACCCGCGTTTC GCGGGACTAGCCGACCTGTTTTCGAAAAAAGAGAACGAGGAAGGTTAA
Upstream 100 bases:
>100_bases GCAAAGCGCCGTCGTCAACTGATTTTAGTGTAAAGAAAAAACATTGACAAAACAAGTTGGCCTATCTATAATTCATATTG TTGCAATTGAGGTGATTCGG
Downstream 100 bases:
>100_bases CTTATCAAGGAGGTGGACAACGATGGCAGTACCATTCCGTAGAACGTCGAAAACTCGCAAACGTCTTCGTCGTACTCACT TCAAACTCAACGTACCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLKIQGDLTLPDARTLEDVTYEF DIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELIMLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRF AGLADLFSKKENEEG
Sequences:
>Translated_175_residues MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLKIQGDLTLPDARTLEDVTYEF DIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELIMLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRF AGLADLFSKKENEEG >Mature_175_residues MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLKIQGDLTLPDARTLEDVTYEF DIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELIMLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRF AGLADLFSKKENEEG
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003772 [H]
Pfam domain/function: PF02620 DUF177 [H]
EC number: NA
Molecular weight: Translated: 19895; Mature: 19895
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLK CCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCHHHHCCEEEEECCCCCCCCEEEEEEE IQGDLTLPDARTLEDVTYEFDIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELI EECCEECCCCCCHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH MLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRFAGLADLFSKKENEEG HHCCCHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLK CCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCHHHHCCEEEEECCCCCCCCEEEEEEE IQGDLTLPDARTLEDVTYEFDIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELI EECCEECCCCCCHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH MLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRFAGLADLFSKKENEEG HHCCCHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]