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The map label for this gene is ylbH [H]

Identifier: 229918535

GI number: 229918535

Start: 2786294

End: 2786857

Strand: Direct

Name: ylbH [H]

Synonym: EAT1b_2822

Alternate gene names: 229918535

Gene position: 2786294-2786857 (Clockwise)

Preceding gene: 229918534

Following gene: 229918536

Centisome position: 92.88

GC content: 47.87

Gene sequence:

>564_bases
ATGCGTGTCATATCTGGAGAACGAAAAGGGACCCGCTTGAAGGCGGTCCCGGGAACGGCGACACGGCCGACAACCGATAA
AGTGAAGGAATCGTTATTCAACATCATCGGACCTTATTTTTCAGGCGGGAAAGCACTAGACCTGTACGCGGGCAGTGGTG
GGCTCGGAATCGAGGCGTTATCACGAGGTTGTGACGAAGCTATTTTTGTCGATCGTCAACCGAAAGCCGTCCAAACGATT
CAAGAGAATTTACGAGCGACCCATTATGAAGTGAAAGGGAAAGTATATCGTCAAGACGCCAAGGCGGTACTCGAACAGCT
CAAGGTTCAACAGGAACAATTTAAACTCATCTTTATGGATCCTCCATATCATGCGGAAGAACATGTGACGTTCTTACAAA
TGATCGATGAGTCGAATCTCTTGATTGATATCGGCGTAGTCGTCTGTGAACACGGCAGCGACGTGACGTTACCGGAACGA
GTAGGACGATTTGAACGAATTAAAGAACAGCGATACTCAGATGTCATCACCATCAGTTTCTATGAGTACGCATCGGAGGA
GTGA

Upstream 100 bases:

>100_bases
AGCGAGCGTCCATTCATTTCCGAAACGTACGAGACAAAATCGAAATAAACAAAAAGATGAAGGTGGCATCACCTTCATCT
TTTCTGCTGGAGGGAAAGAC

Downstream 100 bases:

>100_bases
CACGATGAAACGGATTGCGATTTGTCCGGGTAGCTTTGACCCCATCACGAACGGACATCTAGATATTATTGAACGAGCGG
CGGCCATTTTTGACGAGGTC

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRVISGERKGTRLKAVPGTATRPTTDKVKESLFNIIGPYFSGGKALDLYAGSGGLGIEALSRGCDEAIFVDRQPKAVQTI
QENLRATHYEVKGKVYRQDAKAVLEQLKVQQEQFKLIFMDPPYHAEEHVTFLQMIDESNLLIDIGVVVCEHGSDVTLPER
VGRFERIKEQRYSDVITISFYEYASEE

Sequences:

>Translated_187_residues
MRVISGERKGTRLKAVPGTATRPTTDKVKESLFNIIGPYFSGGKALDLYAGSGGLGIEALSRGCDEAIFVDRQPKAVQTI
QENLRATHYEVKGKVYRQDAKAVLEQLKVQQEQFKLIFMDPPYHAEEHVTFLQMIDESNLLIDIGVVVCEHGSDVTLPER
VGRFERIKEQRYSDVITISFYEYASEE
>Mature_187_residues
MRVISGERKGTRLKAVPGTATRPTTDKVKESLFNIIGPYFSGGKALDLYAGSGGLGIEALSRGCDEAIFVDRQPKAVQTI
QENLRATHYEVKGKVYRQDAKAVLEQLKVQQEQFKLIFMDPPYHAEEHVTFLQMIDESNLLIDIGVVVCEHGSDVTLPER
VGRFERIKEQRYSDVITISFYEYASEE

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=158, Percent_Identity=30.379746835443, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21072; Mature: 21072

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISGERKGTRLKAVPGTATRPTTDKVKESLFNIIGPYFSGGKALDLYAGSGGLGIEAL
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH
SRGCDEAIFVDRQPKAVQTIQENLRATHYEVKGKVYRQDAKAVLEQLKVQQEQFKLIFMD
HCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHEEEEEEC
PPYHAEEHVTFLQMIDESNLLIDIGVVVCEHGSDVTLPERVGRFERIKEQRYSDVITISF
CCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEE
YEYASEE
ECCCCCC
>Mature Secondary Structure
MRVISGERKGTRLKAVPGTATRPTTDKVKESLFNIIGPYFSGGKALDLYAGSGGLGIEAL
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH
SRGCDEAIFVDRQPKAVQTIQENLRATHYEVKGKVYRQDAKAVLEQLKVQQEQFKLIFMD
HCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHEEEEEEC
PPYHAEEHVTFLQMIDESNLLIDIGVVVCEHGSDVTLPERVGRFERIKEQRYSDVITISF
CCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEE
YEYASEE
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]