| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918534
Identifier: 229918534
GI number: 229918534
Start: 2786005
End: 2786241
Strand: Direct
Name: 229918534
Synonym: EAT1b_2821
Alternate gene names: NA
Gene position: 2786005-2786241 (Clockwise)
Preceding gene: 229918533
Following gene: 229918535
Centisome position: 92.87
GC content: 41.77
Gene sequence:
>237_bases TTGAATGAACGGATTGGTTTTGTCGTATATGTGAATTCCTTGAAACAAGTGAAAGCGTTAAGACGTTATGCGAATCTTTA CTTTGTCTCAAAACGAGAGAAGTATGCGTTTCTTTATACTGACCTCGAAGGTCATGAAGCCGTACTCGAACAAGTGAAAG CATTGCCGTTCGTGGAAGCGGTCGTACGAAGCGAGCGTCCATTCATTTCCGAAACGTACGAGACAAAATCGAAATAA
Upstream 100 bases:
>100_bases AAAATCAAGGTCCCGACCGGTAATCCATTCTTTGATGAAGGTGGATGTTCTGGTGGAGGTAGCTGCGGAGGAGGCGGAAG TTGTGGATGCGCCGTCTAAG
Downstream 100 bases:
>100_bases ACAAAAAGATGAAGGTGGCATCACCTTCATCTTTTCTGCTGGAGGGAAAGACATGCGTGTCATATCTGGAGAACGAAAAG GGACCCGCTTGAAGGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MNERIGFVVYVNSLKQVKALRRYANLYFVSKREKYAFLYTDLEGHEAVLEQVKALPFVEAVVRSERPFISETYETKSK
Sequences:
>Translated_78_residues MNERIGFVVYVNSLKQVKALRRYANLYFVSKREKYAFLYTDLEGHEAVLEQVKALPFVEAVVRSERPFISETYETKSK >Mature_78_residues MNERIGFVVYVNSLKQVKALRRYANLYFVSKREKYAFLYTDLEGHEAVLEQVKALPFVEAVVRSERPFISETYETKSK
Specific function: Unknown
COG id: COG4471
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0298 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016979 [H]
Pfam domain/function: PF09902 DUF2129 [H]
EC number: NA
Molecular weight: Translated: 9195; Mature: 9195
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERIGFVVYVNSLKQVKALRRYANLYFVSKREKYAFLYTDLEGHEAVLEQVKALPFVEA CCCCEEEEEEECCHHHHHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHCHHHHH VVRSERPFISETYETKSK HHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNERIGFVVYVNSLKQVKALRRYANLYFVSKREKYAFLYTDLEGHEAVLEQVKALPFVEA CCCCEEEEEEECCHHHHHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHCHHHHH VVRSERPFISETYETKSK HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA