| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918516
Identifier: 229918516
GI number: 229918516
Start: 2768673
End: 2768951
Strand: Direct
Name: 229918516
Synonym: EAT1b_2803
Alternate gene names: NA
Gene position: 2768673-2768951 (Clockwise)
Preceding gene: 229918513
Following gene: 229918517
Centisome position: 92.29
GC content: 43.73
Gene sequence:
>279_bases GTGGCGACAAATTTGGCTGCAATCCAACGGGAGCAAGCGCTTCAATTACTCGAGGCGGATGCTGAAAAAATCCGTTGTCT GATTGAAGTGCAGTTAGAAAACCTAAAAATGCCGAAGTGCCCGCTTTATGAAGAGGTGCTTGATACACATATGTTTGGAC TATCGCGCCAAATTGATTTTGCGGTTCGTCTTGGACTCATTTCAGACATTGAAGGTAAAGGACTGCTCGATTCATTGGAA CAAAAGTTATCTGCCTTGGCAGAAGCTTCAGAATTATGA
Upstream 100 bases:
>100_bases AATGTCGCGTTCATTCATACTGTACATTGAATTATGATGAAAGATAATGTACAGTTGAGTTATGACAAACAGTCTGTCAT CGTACGGAGGAGGGGTCGTA
Downstream 100 bases:
>100_bases ACCTTATACTCAAACTGTGCAAGTGGCGCTGTTTGAGTATTTTTTTATAAGGGTTGTCGGATTGTTTTACATAAGGAAGT GAATACATGAAAACACGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MATNLAAIQREQALQLLEADAEKIRCLIEVQLENLKMPKCPLYEEVLDTHMFGLSRQIDFAVRLGLISDIEGKGLLDSLE QKLSALAEASEL
Sequences:
>Translated_92_residues MATNLAAIQREQALQLLEADAEKIRCLIEVQLENLKMPKCPLYEEVLDTHMFGLSRQIDFAVRLGLISDIEGKGLLDSLE QKLSALAEASEL >Mature_91_residues ATNLAAIQREQALQLLEADAEKIRCLIEVQLENLKMPKCPLYEEVLDTHMFGLSRQIDFAVRLGLISDIEGKGLLDSLEQ KLSALAEASEL
Specific function: Unknown
COG id: COG4838
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0358 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009983 [H]
Pfam domain/function: PF07408 DUF1507 [H]
EC number: NA
Molecular weight: Translated: 10255; Mature: 10124
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNLAAIQREQALQLLEADAEKIRCLIEVQLENLKMPKCPLYEEVLDTHMFGLSRQIDF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHH AVRLGLISDIEGKGLLDSLEQKLSALAEASEL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATNLAAIQREQALQLLEADAEKIRCLIEVQLENLKMPKCPLYEEVLDTHMFGLSRQIDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHH AVRLGLISDIEGKGLLDSLEQKLSALAEASEL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA