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The map label for this gene is ypgR [H]

Identifier: 229918483

GI number: 229918483

Start: 2736223

End: 2737314

Strand: Direct

Name: ypgR [H]

Synonym: EAT1b_2770

Alternate gene names: 229918483

Gene position: 2736223-2737314 (Clockwise)

Preceding gene: 229918482

Following gene: 229918484

Centisome position: 91.21

GC content: 50.82

Gene sequence:

>1092_bases
ATGAAACTAGTAGCAATCGAACCGACACCAAGTCCGAATAACTTGAAAATCATTGTGGACCCTCCGTTTGAAGGGAGAGG
CACAACGTACGACAAAGCGAGTACGGATGCCCCAGCCATCATTCAAGAAATCATCGGGCTTCGAGGCGTCAAATCCGTTT
ACGCCGTGTCTGATTTTCTCGCTGTCGAGCGACATCCGAAACATGATTGGCATGACGTCATGAATGAGATCCGACGGGCG
TTCGGGGAACAAGTTGAGGAAGTCGAATCCACAAAGATGGATACGGACTATGAACCGGTCCATGTATCCGTCCAATTCGT
GCTCGATGTACCGATGCAATTAAAACTCGTCAAAGGGGACGAGGAAAAACGAATCGGATTGTCGAAACGATTCGTCGATG
CAGCGATGGAAGTTCAAGCACAAGTGAAGAATGTCATTCAAGACCGTCGTTGGGTAGAACAAGCCCCACGCTATGGTGAA
TTGGATGAAGTCAGTGTCGTCGCACAAGAAGAATTGGAAGCGGCGTATCCTGAAGAGCGCATCGAGCGGATCGTGGCCCG
GGCGTTTGGTCGTGAAGCGGATTTCGAGGCGAACGCGAACCATCTGCAGTCGGATAATTGGAAAGATCGGATGGCCTTCT
TGGATGAACTCGAAATCCAACATGAAAACATGCCTTATTTCCGTCGTGCCTTGGAAGATTCCGTGATGGCAATCCGTCGA
CAGGCGGTCGTCATGATCGGGATGTTTGAAGAGCGACGTGAGGAATATGTCACATATATCGAACAAGCCTTAGTGGACGC
TTCTCCTATTGTGCGGCGGACGGCTGGGGATACGGTCTCCGACTGGGCATTACCTCAGTCCCAACCTTCCATGATTGAGG
CGTTAAAGGATAAAAACAAACTCGTACGTTGGCGAGCGGCTCGTTTCTTATTCGATTGTGGAGATGAGCGGGCTGTACCT
GCCTTGTCGATTGCGGAGGAAGACCGCGAGTTCGAGGTCTCTTTACAAGCGCGACTTGCGAAAGAGCGGATCACGAGCGG
CGAGACAGCACTCGGGACAGTATGGCAACAAATTTCGAATCGGTCGAAATGA

Upstream 100 bases:

>100_bases
TTATCGCGTTGTTTTAAGTAAATAGATGGTTAATTGAACGCAAGCGACTCGCTTGCGTTTTTTTGTCATTTTCGTCACGA
TGAAGAGTGAGGTGATGAGG

Downstream 100 bases:

>100_bases
GATTTCGTTCGACATGTATTGAATCAAATTGATTTACAATTTAAGGTAAAGAGGAGCGTCTGTAGTACGGATTGCTCCTT
TTTTTCATGAAATCATATGC

Product: PBS lyase HEAT domain protein repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKLVAIEPTPSPNNLKIIVDPPFEGRGTTYDKASTDAPAIIQEIIGLRGVKSVYAVSDFLAVERHPKHDWHDVMNEIRRA
FGEQVEEVESTKMDTDYEPVHVSVQFVLDVPMQLKLVKGDEEKRIGLSKRFVDAAMEVQAQVKNVIQDRRWVEQAPRYGE
LDEVSVVAQEELEAAYPEERIERIVARAFGREADFEANANHLQSDNWKDRMAFLDELEIQHENMPYFRRALEDSVMAIRR
QAVVMIGMFEERREEYVTYIEQALVDASPIVRRTAGDTVSDWALPQSQPSMIEALKDKNKLVRWRAARFLFDCGDERAVP
ALSIAEEDREFEVSLQARLAKERITSGETALGTVWQQISNRSK

Sequences:

>Translated_363_residues
MKLVAIEPTPSPNNLKIIVDPPFEGRGTTYDKASTDAPAIIQEIIGLRGVKSVYAVSDFLAVERHPKHDWHDVMNEIRRA
FGEQVEEVESTKMDTDYEPVHVSVQFVLDVPMQLKLVKGDEEKRIGLSKRFVDAAMEVQAQVKNVIQDRRWVEQAPRYGE
LDEVSVVAQEELEAAYPEERIERIVARAFGREADFEANANHLQSDNWKDRMAFLDELEIQHENMPYFRRALEDSVMAIRR
QAVVMIGMFEERREEYVTYIEQALVDASPIVRRTAGDTVSDWALPQSQPSMIEALKDKNKLVRWRAARFLFDCGDERAVP
ALSIAEEDREFEVSLQARLAKERITSGETALGTVWQQISNRSK
>Mature_363_residues
MKLVAIEPTPSPNNLKIIVDPPFEGRGTTYDKASTDAPAIIQEIIGLRGVKSVYAVSDFLAVERHPKHDWHDVMNEIRRA
FGEQVEEVESTKMDTDYEPVHVSVQFVLDVPMQLKLVKGDEEKRIGLSKRFVDAAMEVQAQVKNVIQDRRWVEQAPRYGE
LDEVSVVAQEELEAAYPEERIERIVARAFGREADFEANANHLQSDNWKDRMAFLDELEIQHENMPYFRRALEDSVMAIRR
QAVVMIGMFEERREEYVTYIEQALVDASPIVRRTAGDTVSDWALPQSQPSMIEALKDKNKLVRWRAARFLFDCGDERAVP
ALSIAEEDREFEVSLQARLAKERITSGETALGTVWQQISNRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR014824
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS; PF08712 Nfu_N [H]

EC number: NA

Molecular weight: Translated: 41591; Mature: 41591

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVAIEPTPSPNNLKIIVDPPFEGRGTTYDKASTDAPAIIQEIIGLRGVKSVYAVSDFL
CEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
AVERHPKHDWHDVMNEIRRAFGEQVEEVESTKMDTDYEPVHVSVQFVLDVPMQLKLVKGD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEECCC
EEKRIGLSKRFVDAAMEVQAQVKNVIQDRRWVEQAPRYGELDEVSVVAQEELEAAYPEER
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH
IERIVARAFGREADFEANANHLQSDNWKDRMAFLDELEIQHENMPYFRRALEDSVMAIRR
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QAVVMIGMFEERREEYVTYIEQALVDASPIVRRTAGDTVSDWALPQSQPSMIEALKDKNK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH
LVRWRAARFLFDCGDERAVPALSIAEEDREFEVSLQARLAKERITSGETALGTVWQQISN
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RSK
CCC
>Mature Secondary Structure
MKLVAIEPTPSPNNLKIIVDPPFEGRGTTYDKASTDAPAIIQEIIGLRGVKSVYAVSDFL
CEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
AVERHPKHDWHDVMNEIRRAFGEQVEEVESTKMDTDYEPVHVSVQFVLDVPMQLKLVKGD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEECCC
EEKRIGLSKRFVDAAMEVQAQVKNVIQDRRWVEQAPRYGELDEVSVVAQEELEAAYPEER
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH
IERIVARAFGREADFEANANHLQSDNWKDRMAFLDELEIQHENMPYFRRALEDSVMAIRR
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QAVVMIGMFEERREEYVTYIEQALVDASPIVRRTAGDTVSDWALPQSQPSMIEALKDKNK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH
LVRWRAARFLFDCGDERAVPALSIAEEDREFEVSLQARLAKERITSGETALGTVWQQISN
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RSK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]